KEGG   Cryptococcus neoformans var. neoformans JEC21: CNB04440
Entry
CNB04440          CDS       T00243                                 
Name
(RefSeq) DNA clamp loader, putative
  KO
K10756  replication factor C subunit 3/5
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03030  DNA replication
cne03410  Base excision repair
cne03420  Nucleotide excision repair
cne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNB04440
   03410 Base excision repair
    CNB04440
   03420 Nucleotide excision repair
    CNB04440
   03430 Mismatch repair
    CNB04440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cne03032]
    CNB04440
   03036 Chromosome and associated proteins [BR:cne03036]
    CNB04440
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNB04440
DNA replication proteins [BR:cne03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CNB04440
  DNA Replication Termination Factors
   ELG1-RFC complex
    CNB04440
Chromosome and associated proteins [BR:cne03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CNB04440
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CNB04440
  Check point factors
   HRAD17(Rad24)-RFC complex
    CNB04440
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_22 DUF3802 AAA_11 AAA_assoc_2 Rep_fac_C
Other DBs
NCBI-GeneID: 3256108
NCBI-ProteinID: XP_568940
UniProt: Q5KLQ5
LinkDB
Position
2:join(1285527..1285547,1285596..1285661,1285713..1285772,1285823..1285873,1285930..1286122,1286176..1286357,1286407..1286712,1286762..1286836,1286891..1286979,1287032..1287059)
AA seq 356 aa
MSLWVDKYRPRTLDDLHYHDGLSSRLKSLAASGDFPHILFYGPSGAGKKTRIMCTLRELY
GPGVEKLRIDQRVFVTPSNRKLDVNVVQSNYHIELTPSDVGMYDRVVIQDILKEIAQTQQ
VDLNAKQRFKVVIINEADALTRDAQAALRRTMEKYMTNMRLILCANSTSKIIAPIRSRCL
LMRVAAPTDDEMSTVLNYVAKKERFMLPSSANNAILETSQGNLRKALLVFEAMRMQHPDL
SGDVEVAKPDWETYCGKVADAILQEQTAQKLLDIRAKIYELLSHCIPPTVVMKTISERLV
EKVDDTLKPQIVHWTAYYELRMRMGSKKIFHIEAFIAKVMTVYKQYTLMGFTEDFE
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtctctctgggtcgacaagtaccgtccgcgaacgctcgacgatctccattatcacgat
ggcctctcatcgcgtctgaaatctttggctgcttctggagactttcctcatattctcttc
tatggaccgtcaggtgctggaaagaagacaaggatcatgtgcactcttcgagaactctat
ggacctggtgtggagaagcttcgaattgaccaaagagtctttgtcactccttctaaccgc
aagcttgacgtcaatgtcgttcagtcaaactatcacatcgagcttacaccatccgacgtg
ggtatgtacgacagagtagtcattcaagatattttgaaggagattgcacaaactcagcaa
gtcgatttgaatgcaaaacagaggttcaaggtggtcatcattaacgaggcggatgctctt
actcgagacgcccaagcagcattacgacgaaccatggaaaagtatatgaccaatatgaga
cttatcctctgcgccaatagcacaagcaaaatcatcgctcctattagaagtcgatgtttg
cttatgcgagtggctgcccctacagatgacgaaatgtcaacagtcctcaattacgtcgcc
aagaaagaacgattcatgcttccatcttctgccaacaatgccatccttgaaacatcgcaa
ggcaatcttcgaaaagctttacttgtttttgaggccatgcggatgcaacaccccgacctg
tctggtgatgtcgaggttgccaaacccgattgggagacttattgtggaaaggtcgcggat
gcgatcttgcaggagcaaacggcgcaaaaattgttagatatccgggcgaagatttacgag
ttgctaagccactgtataccgccaacagttgttatgaagaccatctcagagaggctagtt
gagaaggtggatgacacattaaaaccgcaaattgtgcactggaccgcttactacgaactt
cgaatgcgaatgggatcaaaaaagatattccacatcgaggcatttattgccaaggttatg
actgtttacaagcaatacacacttatgggcttcaccgaagactttgaataa

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