Cryptococcus neoformans var. neoformans JEC21: CNB04740
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Entry
CNB04740 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNB04740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNB04740
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CNB04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
G-alpha
Motif
Other DBs
NCBI-GeneID:
3256059
NCBI-ProteinID:
XP_024514238
UniProt:
A0A0S2LI87
LinkDB
All DBs
Position
2:complement(join(1349339..1349811,1349864..1350236,1350305..1350735,1350794..1351165,1352555..1352605,1352665..1352704))
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AA seq
579 aa
AA seq
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MSRHRFVRNIDLNDELDDGDEEVGMSAEETAAKAKAAQTAKSASLPGKPRVQQVANQKSK
LAVSQPNSPSTSASKSTSKSGSASSTPRTLGKSNLSTDLEGLHLNEEMDEAEREREKEKF
KERQVLSMKQEELIAKAKEEEEKSGKKNVSLIVVGHVDAGKSTLMGRVLYDIGELSEKEK
IANERGSKKLGKGSFAFAWGLDALGDERDRGVTIDIATTHFVTPHRNFTLLDAPGHRDFI
PAMISGAAQADVALLVIDGSPGEFEAGFERGGQTREHAWLVRSLGVKEIIVGVNKMDLVS
WSQDRYEEIVESLKPFLLSAGFNSTKTTFLPLAAMEGINILDNDQPELKKWYSGPALIDA
LDDVEVPTRPYDSPLRIPLSNVFKGQTAIASGVAVSGRLCSGVVQVGDRLRAVPGDEVAN
VRTIEVDDDSAPYAVAGQNVTLYLSNIDPINLSIGTVLCPTSIPVPLVTKFTAQILVFDL
QSPIIAGTPVELFHHSMNLPATISKLVSILEKGQVVKERPRVLQKGTTAMVELSLRPSSS
GKISSIPLETATDNKEMGRVLIRRNGETIAAGMVMELLG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcatagatttgtcaggaatattgacctcaatgatgagctcgatgacggtgac
gaggaagtcggcatgtccgccgaggagacagccgccaaagccaaggctgcacaaacagcc
aaatctgcatctctccccggtaaaccccgagtgcaacaagtagcaaaccaaaaatcaaaa
ctcgctgtttctcaacccaactcaccatcgacaagtgctagcaagtcgacgagcaagtct
ggttctgcctccagcacacccaggacacttgggaagagtaatctgtcaactgatctggag
ggcttgcacttgaacgaagaaatggacgaggctgaaagagaacgagagaaagagaaattc
aaggagaggcaggtgttgagtatgaagcaggaagagttgatcgccaaagccaaggaggaa
gaggaaaagtcggggaagaagaatgtcagcttgattgttgtcggccacgtcgatgccggt
aaatcgacgttgatgggtcgagtactctacgacattggtgaactttctgagaaggagaag
atcgccaatgaacgaggtagtaagaaactcggtaaaggttccttcgcttttgcatggggt
ctcgatgctttaggcgatgaacgtgatcgtggtgtaaccatcgacatcgccaccacacat
ttcgtaacacctcatcgtaacttcaccttgcttgatgcgcccgggcacagagactttatt
cctgcgatgatcagtggtgcggcccaagccgatgtggcattgttggtcattgacggttca
ccaggagagtttgaggcaggctttgagaggggcgggcagacacgagagcacgcgtggcta
gtacggagtttaggagtgaaggagatcattgtgggggtgaacaaaatggatttggtttcg
tggtctcaagatagatatgaagagatagtggaatcactcaagcccttccttctttctgct
ggattcaactctaccaaaacgaccttcttgccacttgccgcgatggaaggtatcaacatc
ctcgataatgaccaaccagagcttaaaaagtggtattctggcccggctcttattgatgcc
cttgacgacgtagaagttcccactaggccatatgacagcccgttgaggataccgttatca
aacgtgttcaagggtcagactgccatcgcaagtggagtagccgtgtcaggaaggttgtgc
agcggtgtggtgcaggttggagacaggttaagagccgtgccgggcgatgaagttgccaat
gttcgaactattgaagtagacgacgactctgcgccctacgctgtagctggtcaaaacgtc
acgctttacctttccaacattgatcccatcaacctgtctatcggtactgttctttgccct
acttctattccagttcctcttgtcaccaaatttaccgctcagatcctcgtttttgacctt
caaagccccatcattgccggtaccccggtggagcttttccatcattccatgaaccttcct
gctactattagcaaactcgtttcgattttggagaagggacaagtggtgaaggaacgtccc
agagtccttcagaagggtactacagcgatggttgaattgagtttgaggccgagcagttcc
ggcaagatttctagcataccactggagactgcgacggacaacaaggagatgggaagggtg
ttgatccgaagaaatggagaaactattgctgctggtatggtcatggagcttctcggttaa
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