Cryptococcus deneoformans JEC21: CNB05570
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Entry
CNB05570 CDS
T00243
Name
(RefSeq) ER to Golgi transport-related protein, putative
KO
K17302
coatomer subunit beta'
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cne04131
]
CNB05570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cne04147
]
CNB05570
Membrane trafficking [BR:
cne04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CNB05570
Exosome [BR:
cne04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
CNB05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
PEP5_VPS11_N
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_LRRK2
PQQ
Beta-prop_DCAF12
DUF7742
Motif
Other DBs
NCBI-GeneID:
3255659
NCBI-ProteinID:
XP_569300
UniProt:
Q5KLE4
LinkDB
All DBs
Position
2:join(1565501..1565503,1565562..1565582,1565653..1565732,1565841..1566144,1566203..1566420,1566484..1566751,1566800..1567485,1567549..1568458)
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AA seq
829 aa
AA seq
DB search
MPMLLDITRKLLARSDRVKSVDFHPTEPHVICGLYNGQVKIWDYETGTDVKAFEVTDVPV
RCVRYIARKNWFVSGSDDFQLRVYNISTGEKITQFEAHPDYIRCLTVHPTLSLVLTGSDD
MTIKCWDWDKGWRCVQIFEGHTHYIMALAINPKDPQTFASACLDHTVKVWSLGNSVPNFS
LEAHEKGVNYVDYYHGGDKPYIVTTGDDRLVKIWDYHSKSCVQTLESHTANVSFAIFHPS
LPIIVSGSEDGTVKIWHSATYRLENTLSYGLERAWCVAYKKSGNEVAVGFDEGAVVVKLG
RDEPAVSMDTSGKIVYARNTEILTANLSTLSDSEPLEDGQRVPLPLRDLGTTEVYPQSLQ
HSPNGRFVTVCGDGEYIIYTSLAWRNKAFGNGSSFAWAGDSNTYAVQEGKAKIRVFRAFK
ERPNLLKSAGNWAVEGIHGGTLLAARGNGFVMFWDWETGSVVRRIEVDATSVSWSATGNF
VVITAEDSFYVLSFNREAYDAKLDSGELIGDEGVEEAFEVIAEISETVKTSKWVGDCFVY
TNSTNRLNYLIGDQSHTVNHFDQGIYLLGYLPSHNRIYVADKDMNIYTYALSVSVVEYQT
AILRGDLDAAAEILPSIPQDQRNRIARFLEAQDLKELALSVSTDPDQRFDLAVSLDDLET
ALSLVRAADESAATPSGDAAGVGAGVSVNQAKWKVVGDKALAAWQMDLAKEAFQNANDLS
SLLLLYTSLSDRTGLSSLAQVASQKGLNNLAFAAYLQLGDVAACIDLLVKTDRLAEAALF
TRSYAPLTNETEKEWGATVKLWKEQLVKDGRGKVAEKVAEPGEDRELFD
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgttactcgacatcaccaggaaactactggcccgatcagacagggtcaagtca
gtagacttccaccctacagaaccccatgtcatctgcggtttatataatggtcaagtcaag
atatgggactatgagacaggcacagatgtcaaggcttttgaagtgaccgacgtccccgtc
cgatgcgtccgctatatcgcccgaaagaactggttcgtttctggctctgacgatttccaa
ctccgagtatacaacatctctaccggcgagaagattacccaattcgaggcgcacccagat
tatatcagatgtctgactgttcacccgacgttgagcttggtcttgactggtagtgacgat
atgactatcaagtgctgggactgggacaagggatggcgatgtgttcagatatttgaaggg
cacacccactacattatggctctcgccatcaacccaaaggaccctcagacatttgcgtcc
gcctgtttggaccataccgtcaaggtctggtctcttggaaactcggtccccaacttttct
ctcgaggcgcacgaaaagggtgtcaactatgtcgactactaccatggcggtgataagccc
tatatcgtgacaactggtgatgaccgacttgtcaagatttgggattaccactctaaatcc
tgcgtgcaaaccctcgaatcacacactgccaacgtgtcgtttgccatcttccacccatca
ctgcctatcatcgtctctggttccgaagacgggaccgtcaagatctggcactctgctact
tatcgactggagaacactctaagttatgggcttgagagggcttggtgtgtggcgtacaag
aagagcgggaatgaagttgctgtcggtttcgatgaaggtgctgttgtcgtcaaactcggt
cgagatgaacccgccgtatcaatggacacttctggcaaaatcgtttacgctcgcaacact
gaaatcctcactgccaacctctccactctctccgacagtgaacccctcgaagacggacaa
cgtgtccccctcccactccgtgacctcggcaccaccgaagtctacccccaatctctccaa
cacagccccaacggccgattcgtcactgtctgcggcgatggcgagtacatcatttacact
tcccttgcgtggaggaacaaggcgtttgggaatggatcgagctttgcttgggcgggcgac
tcgaatacctatgctgtgcaagaaggcaaggctaagatccgtgttttccgagcgttcaag
gaacgacccaacctcttaaaatcggcgggcaattgggctgtggaaggtatccatggcggc
acgttgctcgcagcccgtggcaatgggttcgtcatgttttgggactgggagactggatcg
gtcgtgagaaggatagaggtggatgctactagtgtgagctggagcgcgacgggtaatttc
gtcgttatcactgcagaggactcgttctacgtgctctcgttcaatagggaggcgtatgat
gccaagttggatagtggagagttgattggagatgaaggtgtggaagaggcgtttgaagtt
atcgccgagattagcgaaacggtcaagacatctaaatgggtcggcgactgctttgtctac
actaactccaccaaccgccttaactacctgatcggcgaccaatcccacactgtcaaccac
tttgatcaaggcatctacctccttggttacctgccttcccacaacaggatctatgtcgcc
gacaaggacatgaacatctatacctacgccctctccgtctccgtcgttgaataccaaacc
gccatcttgcgaggcgaccttgatgcagctgcagagatcttgccgtccattccgcaagat
cagcgaaaccggatcgcgcgattcttggaggcgcaggacctgaaggaactagcactctca
gtgtcgacggatccggatcagaggtttgatctggctgtatcacttgatgatctcgaaacg
gcgctttcactcgtgcgcgctgccgacgagtctgctgctactccttccggtgacgccgcc
ggtgtcggtgcaggcgtcagtgtaaaccaagcgaaatggaaggttgtcggcgacaaggcc
ctcgccgcatggcaaatggacctcgcaaaagaagcgttccagaatgccaacgacctctca
tccctcttactcctctacacctccctctccgaccgaaccggtctctcctcccttgcccaa
gtcgcctcccaaaagggtcttaacaatctcgcttttgcagcatacctccagcttggcgac
gttgccgcctgcatcgacctcttggtcaagactgataggctggccgaagcggcattgttt
acaagaagttatgcgcctttgacaaatgagacggagaaggaatggggagcgacggtcaag
ctttggaaggagcagttggtaaaggatggaagagggaaagtggcggagaaagtggcggag
ccgggggaggatagagagttgtttgactaa
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