KEGG   Cryptococcus deneoformans JEC21: CNC00140
Entry
CNC00140          CDS       T00243                                 
Name
(RefSeq) expressed protein
  KO
K03504  DNA polymerase delta subunit 3
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03030  DNA replication
cne03410  Base excision repair
cne03420  Nucleotide excision repair
cne03430  Mismatch repair
cne03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNC00140
   03410 Base excision repair
    CNC00140
   03420 Nucleotide excision repair
    CNC00140
   03430 Mismatch repair
    CNC00140
   03440 Homologous recombination
    CNC00140
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cne01009]
    CNC00140
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cne03032]
    CNC00140
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNC00140
Protein phosphatases and associated proteins [BR:cne01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     CNC00140
DNA replication proteins [BR:cne03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    CNC00140
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      CNC00140
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     CNC00140
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 3256766
NCBI-ProteinID: XP_024512343
UniProt: Q5KLA8
LinkDB
Position
3:complement(join(45448..45692,45754..46141,46207..46473,46530..46600,46662..47092,47142..47197,47263..47334))
AA seq 509 aa
MITPEEQKQVTRKLTHWIESESKIVTYRTVSREIGCHVNVAKNILLRHFEANPSLAATYL
LTGPLLSNSVLTQTTIQSGTTSKDGKSLRDLGDGMVKIVDMDQNSDAGDSDVEGLESQSQ
GQSKAQRIGLMGTDDEDERMDGVGNDRGAQVGDGGIGGGKRLGELGFKRERVKRWGVVLA
TAEALEEKKTLFDESELNIHIYALSPAPVKDPAQFLIASLELHDNANMYNSSIYGSITGH
AFKPSAKPNPLAPAKPPIKEAAAPSIFARGPKEKMVKEQTKKEVKKQGSTKDVKDEPLQS
RSSTSATTAPAKNKAQPLNKSNSKKRVINSDTEEDEPGPAKAKASTPTSKGGSSKTALEP
TSSMVAREDKAALEAMAGMDVDFSDNEEPLAARPKAKEEARPLRKSATGRKVRRVKKTKR
EKDDKGYFVSKDYWTDESYSGESEPEQVETQPRAQPASKRGGSKPPMKARESASSVGSGS
GAGAGGNMKKSAGKPTGGQSTLMGFFKKK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgataacaccggaggagcagaagcaggtaacgcgtaagcttacgcattggatagaaagc
gaaagcaagattgtgacttatcggacggtgtcgagagagataggatgtcatgtcaacgta
gctaaaaacatcctgctgagacactttgaagccaacccctcacttgcggctacatacctc
ctgactggacctcttctctccaactctgttttgacacaaaccaccatccaaagcggcacg
acttcgaaagacgggaaaagtttgcgcgacctgggagatgggatggtgaagattgtggat
atggaccagaactctgatgcgggggattcagatgttgagggattagagtctcagtctcag
ggacaatcaaaagctcagcggataggattgatgggtaccgacgatgaagatgagaggatg
gatggggtgggtaacgatagaggtgcacaagtaggggacggaggaatcggtggtggcaag
aggttgggcgaacttgggtttaagagagagagagtcaagaggtggggagtcgtactggca
actgccgaggcgcttgaagagaaaaagacactttttgatgaaagcgagctgaatatccat
atttatgctctttcacccgctccagtcaaagatccggcgcaattccttattgccagtctt
gaactgcatgataatgcgaatatgtacaactcatccatctacggttcaattactgggcac
gcattcaaaccgtctgccaaaccaaaccccttggcccccgccaaacctcctatcaaagaa
gccgcagccccttctattttcgctcgaggtccgaaagaaaagatggtcaaagaacaaacc
aagaaagaagttaagaagcaaggctcgaccaaggacgttaaagatgagccgttacagtct
cgctcgtccacgtctgccactactgctcctgcaaaaaacaaggcccaaccactcaataaa
tccaatagcaagaaacgtgtcatcaattctgatactgaagaagacgagcccgggcctgct
aaagccaaggcatcaacaccaacgtcaaagggtggaagcagcaagacagcgctcgaaccg
acctcttcaatggtggccagggaggacaaagcagcgctcgaagctatggctggtatggac
gtcgacttttcagataatgaggaacctttggctgcgagaccaaaggcaaaggaggaggcg
aggccgttgagaaagagtgctactggaaggaaagtccgaagagttaaaaagacgaaacga
gaaaaggatgacaagggatactttgtatcaaaagattactggaccgacgagtcatactcc
ggtgaatccgaaccggaacaagttgagactcagccgagagcccaaccggcgagcaaaagg
ggaggtagtaagccgcctatgaaggctcgagaatcagcgtcgagcgtggggagtgggagt
ggagcgggtgcaggtggtaatatgaagaagtcggcgggtaaaccgactggggggcagagt
acgcttatgggtttcttcaagaaaaaataa

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