Cryptococcus deneoformans JEC21: CNC01130
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Entry
CNC01130 CDS
T00243
Name
(RefSeq) ribosome biogenesis-related protein, putative
KO
K14848
ribosome assembly protein RRB1
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNC01130
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CNC01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
CAF1C_H4-bd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
3256172
NCBI-ProteinID:
XP_024512543
UniProt:
Q5KL14
LinkDB
All DBs
Position
3:join(316633..316717,316763..317735,317788..318109)
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AA seq
459 aa
AA seq
DB search
MGEFEDRWEDEIESEEEVVEHDADGEADDDFTPAQEDAEPPAAPTQTYLPGTAIAEDEQL
VPDNSVYLALHSLSYAWPCLSFDVLRDSLGTDRATYPHTSWIVTGTQAGEVPGEGKAKDE
VVIMRLGNLSKTQHDDDDDSDDGKDDDDDEADDEDATLDFLTIPHVGSVNRVRAAPAPVG
GAVPDPYHVATFSETGKVHIFDVRPYIDTLAGPSRPRQKLPVHTISNHGRAEGFAVEWGA
TGLLTGDIDRKIYLTTLTPSGFTTSPNPYLSHTSSVEDLQWSPTEPTVFASASADRTVRV
WDVRAKGRRSVVSVEAHSEDVNVISWNKTVDYLLVSGGDEGGLKVWDLRMFKDTPSPVAQ
FQWHTAPITSVEWHPTDSSVFAASGSDDQLTLWDLSVEPDEDEAPIGPADGNITAVPPQL
LFVHQGQKDVKELHWHPQIPGMVISTASDSFNVFKTISC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtttgaggacagatgggaagacgagatcgagagcgaagaggaggtcgtcgag
cacgatgcggacggcgaagcagatgacgactttacgcccgcccaggaagacgccgagccc
cctgccgcgcccacccagacgtacctccccggcacagccatcgccgaagacgagcagctc
gtgcccgacaactctgtctacctcgccctccattcgctctcctatgcgtggccctgcctg
tcgttcgacgtcctgcgcgatagcctcggcacagaccgcgcgacgtacccgcacacctcg
tggatcgtcaccggcacgcaggccggcgaagtccccggcgagggcaaggccaaggacgag
gtcgtcatcatgcgcctcggcaacctgtccaagacccagcacgacgacgacgatgattcc
gacgacgggaaagacgacgacgacgacgaggcggacgacgaagatgccaccctggacttt
ctgaccatcccgcacgtcggttcggtcaaccgtgtgcgtgcggccccggctcccgtaggc
ggcgccgtgcccgacccgtaccacgtcgccaccttttccgagaccggcaaggtccatatc
tttgacgtccgcccttatatcgacaccctcgccggtccctcgcgcccccgtcaaaagctg
ccagtgcacaccatctccaaccacggccgcgcagaaggttttgccgtcgagtggggagct
accggcctgctgacgggcgatatcgaccgcaaaatctacttgactaccctcacaccctcc
ggcttcaccacttcccccaacccttacctcagccacacctccagcgtcgaggatcttcaa
tggagtcctactgaacctaccgtctttgcctcggcttctgcagacaggaccgtcagggtc
tgggacgtgcgtgcaaagggaagaaggagtgtcgtcagcgtcgaggcgcacagcgaggac
gtcaatgtcatcagctggaataaaacagtcgactacctcttggtttctggcggtgatgag
ggtggattgaaagtttgggatttgagaatgttcaaagacacaccatcccccgtcgctcag
ttccagtggcataccgcacccatcacatccgtcgaatggcacccgaccgactcttccgtc
tttgccgcctctggctccgacgaccaactcaccctgtgggacttgtccgtcgagcccgac
gaggacgaggcgccaatcggccccgcagacgggaacatcaccgccgtcccaccccaattg
ctgttcgtccaccagggacaaaaggatgtcaaggagttgcactggcacccccagatcccg
ggcatggttatcagcacggcgtccgattcgtttaatgtcttcaagactatttcttgctag
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