Cryptococcus deneoformans JEC21: CNC01370
Help
Entry
CNC01370 CDS
T00243
Name
(RefSeq) pseudouridylate synthase 4, putative
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cne03016
]
CNC01370
Enzymes [BR:
cne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CNC01370
Transfer RNA biogenesis [BR:
cne03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CNC01370
Prokaryotic type
CNC01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
3256480
NCBI-ProteinID:
XP_569456
UniProt:
Q5KKZ0
LinkDB
All DBs
Position
3:join(381105..381181,381232..381404,381457..381512,381566..381720,381769..382639)
Genome browser
AA seq
443 aa
AA seq
DB search
MPKALPTPTLPLNGLFPIAKPSGKSSMRVIDRITPLLLDSKLFDDPVKRAQPQMKGKRKK
NLTQFGLKIGQGGTLDPLADGVLVLGVNRGTKHLNQFLECSKEYESIGLIGATTTSMDAD
DPVLSTAPWEHITREDVEKVLDRFRGEIMQVPPIFSALKMDGKPLYEYARESKPLPRPIP
ARKCQVSIELIDFTPASVTPGDGGHDYHWPEKRLTSEEKETFRRLTEIVHNAQTGPVETA
KTSGNKDQVEEEKLRVVEPLVPDLDAPEYPEISPNNGLRPPTFTVRMTVSSGTYVRSIVN
DIGLALGCGAHVVKLTRTRQGEFSLYGDEKALSTASASAPAEGEEASVNEDRREAPGPSG
GSIPWTVWERALAERDEMIKREKLEKEEAIMAGMSAEEIHQVYNPEAIKQRRWEGGWKEW
EVEVLKRFKPVPVPINGGHGFRI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggctcttcctacccccactttgcctctcaatggccttttccctatcgccaaa
ccttcaggcaaaagctctatgagagtaattgacagaataacgccacttctgctcgactct
aaactgtttgacgatcccgtgaagcgtgcgcagccgcaaatgaagggaaaacgtaagaag
aatctaactcagtttggtctcaaaattggtcaaggtggaactcttgatcctttggccgat
ggtgtgttagttttgggtgttaaccggggcacaaaacatttgaatcagttccttgagtgt
agcaaggaatatgaaagcataggtttgattggagcaacgaccacatctatggacgcggac
gatcctgtcctgtctactgccccttgggagcacatcactcgagaggatgttgaaaaagtt
ttagatcgctttcgaggcgagatcatgcaggtgcctcccatcttctctgcgttgaagatg
gacggtaagccgctctacgagtatgctcgagaatcaaaacctcttcctcgacccattcct
gcacgaaagtgccaggtatctatcgaactgatagattttactcctgcatctgtcactcct
ggcgacggtgggcatgattaccactggcccgagaaaaggcttacatctgaagagaaggaa
accttcaggagactgactgagattgtgcacaatgcacaaacaggtcctgttgaaactgca
aaaacttctggaaataaggatcaagtggaagaggaaaaactaagggttgtagagcctctg
gtgcccgaccttgacgctcccgaatatcccgaaatctcgccaaataacggtttgcgtccc
ccaacctttacagttcgtatgacagtttcaagcggaacctatgtgaggtcgatcgtcaat
gatattggattagcgcttggctgcggtgcccatgtcgttaaattgactagaacaaggcag
ggagagtttagtctctacggtgatgagaaggctttgagcacggcgtctgcctctgccccg
gctgagggcgaagaagctagtgtgaatgaggacagacgggaagccccgggtccttctggt
ggcagtattccttggacagtctgggaacgtgctcttgctgagagggatgagatgattaaa
cgggaaaagctggagaaggaagaagctatcatggccgggatgagtgcagaggaaatccat
caagtctataatcctgaggctatcaagcagagaaggtgggaaggagggtggaaagaatgg
gaagtagaggtgctgaagcggttcaagcctgtgcctgtacccatcaacggaggtcatgga
tttagaatttaa
DBGET
integrated database retrieval system
