KEGG   Cryptococcus deneoformans JEC21: CNC01550
Entry
CNC01550          CDS       T00243                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K08736  DNA mismatch repair protein MSH3
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CNC01550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNC01550
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CNC01550
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_27 AAA_29
Other DBs
NCBI-GeneID: 3256655
NCBI-ProteinID: XP_024512380
LinkDB
Position
3:complement(join(431459..431678,431731..431809,431863..432032,432073..432196,432247..432257,432319..432401,432457..432482,432536..432632,432698..432929,432981..433025,433083..433147,433208..433309,433368..433746,433799..433864,433920..433929,433980..434032,434087..434136,434186..434232,434280..434360,434413..434663,434712..434838,434889..435103,435157..435282,435344..435409,435463..435491,435542..435563,435609..435624,435674..436434,436506..436528))
AA seq 1191 aa
MPSEGSQQPSLDSFFKRKNPRVEPYSRTGNNAIIDLTDSPPNKKIKLDDEGSQKNRSMTQ
TSSSYFKGHPTARPLSVDKRLPRKPSAAIQAYKLQDVIPPQPSHSGLAFETCSLVPQASF
VPDSQPEPSASPAPQRTTEQLKRHEEWKTRILAMSGSFRRKRSLALDEAVAAEAREAAGL
EDEGTPFDGSDGDDYKSESEKNAEEVGKQLKKYVAKELAGKGKSKGKKKEEIGPSGLAYT
PLEKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGIVAFPNRNFFTASIPTHRL
HIHVKKLLSLGYKVGVITQTETAALKKIGDNRNAPFARKLTHLFTAATYVEDPSLSSSSS
SSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVPGTGDITWDEFDD
SQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNAVRIERIDNIPEY
DAAFDFLTNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLSQDGADISLDEEIYL
ASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKHTSSFVRFANRSHMLLSSN
TLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLREWVGRPLLDVAALKARADAIEEI
MENNSYHMEKLRSLLINMPDLVRGLTRVQYGKATPNELATLLITLVRLASEFKPNMGNVF
RSCLLNNIPNTLPTILDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCE
MELNEHLMELRKILKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTP
KILAITKERTQHLEKLSIVAREAFIAFQSEVAEYHELVVVSKQIAVIDCLMSLAQTAAAS
GYCKPKFVAEPELKILAGRHPMVEMLREESYVPFDIHFSKEEGTTKIITGPNMAGKSSTV
RAMALIVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILQTI
TPRSLVVLDELGRGTSTYDGIAIAYATLSHIAEIGCNTLFVTHYPTVAQDLAREKPDKIS
NWHMSFDEIQMPDGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSSSLKA
ETQERLRGIVARRVGWMLHNLFDNKTSSSQVLRNVEMLHNSLSSSSISFSQ
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgccttccgaaggctctcaacaaccatcccttgactctttcttcaagcgtaaaaatcct
cgagtcgagccatactcaaggaccggcaataacgctattatagacctcacagactcccct
ccaaacaaaaaaatcaaacttgatgatgagggcagtcagaaaaatcgatctatgacacag
acgtcttccagttatttcaaaggacaccccacagcgagacctctctcggtagataaaagg
ctgcctcgcaagccatcggctgccatccaagcttacaagcttcaagatgtaataccgccg
caaccctctcattcaggtttagcttttgaaacatgctctttagtccctcaagcgtcgttc
gtgccagattctcaacctgagccgtcagcaagtcctgcaccacaacgcaccacagaacag
cttaagaggcatgaagaatggaagactaggatccttgccatgagtggttcgtttcgacga
aaaaggtctttggctctagatgaggcagttgcggcggaggcaagggaagctgctggtcta
gaagacgaaggcactccctttgacggcagtgatggggacgactataagagcgaaagcgaa
aagaatgcagaagaagtgggaaagcagcttaaaaaatacgttgctaaagagctagcaggg
aaagggaaaagtaaagggaaaaagaaggaggaaatagggcctagcgggttagcatacacg
cctttagagaagcaattcatggaaatcaaggagcaaaacagggacgttctccttcttatg
gaagtggggtataagtacaaatttcacggcgaagacgcaaaaacagccagtcgcgaatta
ggcatcgttgcctttcctaacaggaattttttcactgcgtcgatacccactcatcgactg
cacatacatgtcaaaaaactgctgtcattgggatacaaagtgggcgtgattactcagaca
gaaacggcggcccttaaaaagattggcgataacaggaatgccccgtttgctcgcaaactc
actcaccttttcactgctgccacctatgtcgaagatccctctctatcatcatcatcgtca
tcatcttcatccgtccgctttgatgatcctgtcgtccctggcaccgctcctccacctaca
aatgctctcgttgctatcgtggaacagcctgtggatagggccagcgatgacagagttaag
gttggcctagtttgtgtcgtcccagggacaggagatatcacatgggatgaatttgacgac
tctcaaattcggacagaattggaaacccgccttgctcacctatcacctgccgaacttctt
cttccaaagcagaggcttagcaaggcgacggagaaggtgctgacgtatttcgctggcgaa
ccgaaacatcgaggcagaaacgctgtccggattgaaaggatagacaatattccagaatac
gatgcggcgtttgattttctgacgaatttctatcattgtaaagagcacaaagctacagta
tccaaaggggatgtgaatgatgaacggcaccttatgacagagggaaataagcaatggagc
ttgcaacccaagttgagccaggatggggcagatatctcattggatgaagagatctatcta
gcatccggtgttagctctagcaaagcaatcctaaccctagttgattttcccaaacaagtc
gtgatctccatggctgtcgctattcgatacatgaaaaggttcggtttggaaaatgctttt
aagcatacttcctcgtttgtcagatttgcaaaccggtctcatatgttactgtcaagtaac
actctggccaatttagagatctatcagaaccagactgatggaggattgtatggaagcctg
atttggttgcttgaccactgcaagacccgcatgggcaagcgtcttcttcgcgaatgggtg
ggaagaccattacttgatgttgcggccttgaaagctcgggccgacgccattgaagaaatc
atggaaaataatagctaccatatggagaaacttcgcagccttttgatcaacatgccggat
cttgttagaggcctaactcgagttcagtatggaaaagcaacgccgaacgagctcgcgact
ttacttattaccctcgtacgcttggcttcagagttcaagcccaacatgggcaatgttttc
cgatcatgccttttaaacaacatacccaatacgctgccgacaattctagatacttcccaa
agatttctaaatgccttgaacttaaaacaagcaagggaaaatgacgtggccaatttatgg
gctgacccagaccgattcccggatatacaggatgtcaaagattgtataagcgtctgcgag
atggagttgaacgaacacctcatggaattgcggaaaatactgaaaaagcctacacttagg
tatattacagtctcgggcattgagtatcttgtggaagttccaatccgagatacgaaaatc
gtacctgctcagtggatgaaaattagcgccactaggactgttaatcgatatcatactcct
aaaatccttgcaatcacgaaagagagaacacagcatctagagaagctgtctattgtcgct
cgtgaagcatttatagccttccagtctgaagttgccgaatatcatgagcttgttgtggtt
tccaaacaaattgccgtcatcgactgtctgatgtccctggctcaaacggctgctgcctcc
ggatactgtaaaccgaaatttgtagctgaaccggagctgaaaatattagctggcagacac
ccaatggtggaaatgctcagagaagagtcatatgtcccatttgatatccacttttcgaaa
gaggagggaacgaccaaaattatcactgggccgaatatggcaggtaaaagttcgactgtt
cgtgcgatggccttgatcgtatgtatggcacaaatcggatctttcgtgcctgcggcctcc
gtgacacttagtgtacatgattctgttcaaacgaggatgggggcttctgatgaaattgga
cgagggaagtccacgttcatggtagaattatcagagacgagcgacattcttcaaaccata
acaccaagatctttggtagttttggatgagctcggccggggaacaagtacttacgatggc
attgctattgcttatgctactttgtcgcacatcgccgagatcggatgtaacacgctattt
gtcacacattatcctacggttgcgcaggacttggccagagaaaagcctgacaaaattagt
aactggcacatgagttttgacgagattcagatgcctgatggcggtgcagagatcactttc
ttgtatcagctcacacgcggattacaagaggcctcttttggagtatggtgtgctcgattg
gcaggtctaccaaaacctatcctcgacactgctcaaatgcggtccagttctctcaaggca
gagacgcaagaaagattgagaggtatagtggcaagaagggttggttggatgctgcacaat
ctgtttgacaacaaaaccagctccagccaagtgctcaggaatgtagagatgttgcacaac
tctttgtcttcaagttctatttcattctctcagtag

DBGET integrated database retrieval system