| Entry |
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| Name |
(RefSeq) histone deacetylase 1-1 (hd1), putative
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| KO |
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| Organism |
cne Cryptococcus deneoformans JEC21
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| Pathway |
| cne03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:cne00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNC02060
03083 Polycomb repressive complex
CNC02060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:cne03036]
CNC02060
Enzymes [BR:cne01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CNC02060
Chromosome and associated proteins [BR:cne03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CNC02060
HDAC complexes
Sin3A-HDAC complex
CNC02060
BRAF-HDAC complex
CNC02060
REST complex
CNC02060
SHIP complex
CNC02060
MiDAC complex
CNC02060
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CNC02060
Heterochromatin formation proteins
Other heterochromatin formation proteins
CNC02060
Chromatin remodeling factors
NuRD complex
CNC02060
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:complement(join(576723..577318,577370..577521,577577..577666,577717..577800,577858..577933,577985..578093,578151..578243,578300..578441,578490..578628,578684..578758,578825..578942,579030..579335))
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| AA seq |
659 aa
MSSAAIHPPLDFSPVRPDGRRVAYYYDHDVGNYHFGLGHPMKPHRIRMTHNLVVNYGLAD
DYEAMEEEGRRKVNARMGMENDEARWVNAEMRGSRAKRMQIFRPRRATKTDMTRFHTDEY
IELLESVLPENADALTGNRSRGLTGSDCPAVEGIFEFSSISAGGSIGAAEKLNEGIADIA
INWAGGLHHAKKTEASGFCYVNDIVLGILELLRVNSRVLYIDIDVHHGDGVEEAFYSTDR
VMTCSFHLFGNFFPGTGTLKDVGLGKGKGYAVNVPLREGITDEGFHSIFKPVIAEIMEHY
RPCVVVLQGGADSMSGDKLGRLNLSDKGHAECAKFLRTFSVPLMLLGGGGYTTKNVARAW
TRETAIACGQELSEDLPSNQYMEYYGPRYKLEVLPSNVEDFNTPEYLEDLKRQISNHLKN
LPFAPSAQMRQITGSNVSQAVGLSNEWETDDPEDQIDQRLKKLFASKNLNGTYTQESDAL
LSDLTSISRIRRQGGPKKLPRSSGTCGRARKRYLEDIAMGEDPCCLLPAMTSKKNERKTI
AKSGSSAPPTSAPEWHAHLTVHEMKSRPSLGEILQQPSPGSEDECDRNRCITEGSQLHMI
AQGRGKRSFFSRKGLPPSIISPQAIIGGSTVKVDRLIRARMAAATNNSPVVVEWDRQQE |
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| NT seq |
1980 nt +upstreamnt +downstreamnt
atgtcctcggctgctattcatcctcctctcgacttctcgcccgttcgcccagatggccgg
cgcgtagcttactactatgaccacgacgtaggcaactaccattttggactcggccatcca
atgaagcctcatcggattagaatgacacataaccttgtagttaactatggactggccgac
gactatgaagctatggaggaagagggcagaagaaaggtgaatgctcggatggggatggag
aatgatgaagcaagatgggtgaatgccgagatgcgagggtcgagagcaaaacggatgcag
atctttagacctcgtcgagcaaccaaaacagatatgacgagattccataccgatgagtac
atcgagctgcttgagagcgtactaccggaaaatgcggatgctctcactggaaataggtca
agaggcttaactgggtccgattgtccggcagtcgaaggtattttcgaattcagctctatt
tctgcaggtggatccattggtgctgctgagaagctcaatgaaggtatagccgatatcgca
atcaattgggctggtggcctacaccacgccaaaaaaactgaagctagtgggttttgttac
gtcaacgatattgtcctaggaatcctcgaacttttgcgagttaactcgcgggtgctctac
atcgatatcgatgtacatcacggcgacggagttgaagaagcgttttactctacagacaga
gttatgacttgttcttttcatctctttggtaacttcttcccaggaactgggactctcaag
gatgttggcctgggtaaaggtaaaggctacgccgtcaatgttccactgagagaaggtatc
acagacgaagggtttcacagcatctttaaacctgttattgccgaaatcatggagcattac
cgcccatgtgtggttgtattgcaaggcggagcggacagtatgtcaggagacaagttaggg
aggttgaacctgtcggacaaagggcatgctgagtgtgccaagtttttgaggactttcagt
gtaccattgatgttacttggtggcggggggtatacgacgaaaaatgtggcaagggcgtgg
actagagaaacggctatcgcatgtggacaagagctatcggaagatttaccaagcaatcaa
tatatggaatattacgggcctcgatacaaactagaagtattaccttccaacgttgaagat
ttcaatacaccagaatatctcgaggatcttaagcgccagatttccaaccacttgaaaaat
ctccctttcgctcctagcgctcagatgcgacaaattactggtagcaatgtgagtcaagca
gtagggcttagcaatgaatgggagacagacgatccggaggatcaaattgatcagagactc
aaaaaactgttcgcaagtaagaatctgaacggtacctatactcaagagagtgacgctttg
ttgagtgacttaacaagcatttcaagaattagacgccaaggtggtcccaaaaaactgcct
aggtcttcaggaacatgtggcagagcaaggaaacgatatcttgaagatattgcgatggga
gaagatccttgttgtcttctgcctgccatgaccagcaaaaaaaatgagagaaaaacgatt
gcgaagagcggaagttcagcgcctccaacatcagcgccagaatggcacgcacatttaacc
gtgcatgaaatgaaaagcagacctagtctaggtgagatccttcagcaaccgtcgccaggc
agtgaggacgaatgtgatcggaatcgttgtatcactgaggggtcgcagctacatatgata
gcgcagggaaggggaaaaaggagtttcttttcgcgcaaaggtctgccaccctcaattata
tctcctcaggcgataataggaggatcaacggtaaaagtcgacaggctgatcagagcgagg
atggcggcggcgaccaataattctccggtagtggtggaatgggatcgacaacaggagtaa |
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