Cryptococcus deneoformans JEC21: CNC02340
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Entry
CNC02340 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNC02340
Enzymes [BR:
cne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CNC02340
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
90S particles
Helicases
CNC02340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
WHD_HA2
AAA_22
AAA_19
CDC45
nSTAND3
ResIII
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-GeneID:
3256474
NCBI-ProteinID:
XP_024512553
UniProt:
Q5KKP2
LinkDB
All DBs
Position
3:join(668793..669002,669061..669480,669537..670461,670511..671188,671247..671396,671447..672267,672320..672436,672493..673047)
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AA seq
1291 aa
AA seq
DB search
MAGPPVRQRYNAKARGSVAGGSSHKKRKNLSKERTEEDAQDNETDQHAAVFEDPTAGMSS
KKRKRFESYMAKKLKSEQRLETFKLLQSLAPSSSTSASLLSASTLGQNPMNPTSAKERQE
KREDRLVRRGIDRLSRRFGEGDDHSGESENDASSRKGKGKAKEVTVEVIRDGQAEETEEV
KTTVIPSKGERKAEIKAAEKGKGKGKLPKKAGWNPNLLSTQAPNSSSSEFDSSDSGNDNS
DDEEPKKAAEPSPRLEVGPEPVSETIKPPVSAPSAPTVLGGALKKSTDGQVVKPRVEVRR
KKGFVYGMFGRRGIEHREDSDDEDEDDEDEDDADDDDEEEEDDDEMDSDEEASDEEDGED
SEEEGSEEDEEEEVAPPKKKRSLGFKDWALKQMGQTSQPSAPDLLAAEPTTTLYKSQPLL
AARVGEYIGPLGQELVIPTTSLLDQSKDSDKSKVRPNISRRPSVSETRMGLPILAEEQSI
IESILMHPVVIICGETGSGKTTQVPQMLYEAGFGYKGSDNPGMVAVTQPRRVAAVSLAER
VRSELNLPPNSSLVAHQIRYSSTTSPDTAIKFMTDGVLLRELASDFLLSRYSVVVVDEAH
ERGVNTDVLVGVLSRVAKLREKLWREGKQDVKPLRIVVMSATLRVSDFAENPTLFSKPPP
VIHIAARQHPVTVHFSRRTVSDYVTEAYKKVSKIHARLPPGGILVFMTGQGEIQALCRKL
EKKYGAKKSSQKTQVINDNSLPPEEREAEEVEFGKDEDLAADVDDGAAESDPEALDTDDE
IEGIPGLEFDEPADAPLHVLPLYSLLPNDQQMLVFKPPPEGHRLVIISTNVAETSLTIPG
IRYVVDSGRAKERHYDPINGVQSFQVSWISKASASQRAGRAGRTGPGHCYRLYSSALFED
HFEQFSKPEILRMPIEGVVLQMKSMNIDAVINFPFPTPPDRAALRRAENLLTNLGALSLP
TLTKMINGVQHKGSGGGQITDLGKAMAGFPVSPRFAKMLAIGTQHDCMSYIIAIVAGMSV
GDPFIHEQSLEVDEEEDKVAEISHIKSEDIREKEQRKETRRRFFKAQQQFLALGQGTSDM
FKLLAAIGAYEFDPSPAFCAKTFIRLKAMQEIHQLRAQISSIAKVPLSKLLPPSDTQLKV
LRQILAAGFIDQVAVREDLVLKKGVSYESTRGVAYRAVGLGSEPVFIHPSSALFHCAPPD
FVVFSEIVRTSKPWMKGVTKINPIWLPSLGKGLCTFSKPMEMPTKGFARKSGLKDDEREV
FVTPHFKDLGIDLPVMKKKQRREGTRWILVD
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcccaccagttcgtcagaggtacaatgcaaaagcaaggggatcagtcgcaggt
ggatcctcgcacaagaagaggaagaacctcagcaaggagcgcaccgaggaggacgcccag
gacaacgaaaccgaccagcatgctgctgtattcgaagacccaaccgctggcatgtcttca
aagaagcgaaagcgtttcgagtcttatatggccaaaaaactcaaatcagaacagcgtctc
gaaaccttcaaacttttacaatccctcgcaccctcttcctccacatctgcttcactccta
tcagcatctaccctgggccaaaaccccatgaatcccactagcgcaaaggaaaggcaggag
aagcgtgaagatcgccttgtgcgtaggggaattgaccgattgtctcgacggttcggagaa
ggagacgatcatagtggagaaagtgagaatgatgcatcgagtagaaaaggcaagggaaaa
gcaaaggaggtcacggttgaagttattcgggacggacaagctgaagagacagaggaggtc
aaaaccacagtgataccctccaaaggtgaacggaaggctgagataaaggctgctgaaaaa
ggcaaggggaagggtaagcttcccaagaaggccggatggaatcccaaccttctttctaca
caagctcctaattcatcatcatccgagtttgactcgtctgactctgggaatgataattcc
gacgatgaagaaccaaagaaggcagctgaaccttctcccagacttgaagttggaccagag
ccagtctctgaaaccataaaaccgccggtatcggccccctctgctcctactgtgctaggc
ggggctctcaaaaaatcgaccgatgggcaagtcgtgaaaccgagagttgaagtacggcgg
aaaaagggctttgtctatggtatgtttggaagacgaggaatagagcacagagaagattca
gatgatgaggatgaggatgacgaggacgaagatgatgcggatgatgatgatgaggaggag
gaagatgatgacgagatggatagcgatgaggaggccagcgatgaagaagacggagaagac
tcggaagaggaaggcagtgaagaggacgaagaagaagaagttgctccccccaaaaagaag
cgatcgcttggtttcaaggattgggcacttaaacagatgggtcaaacatcacagccttct
gcacctgatctcctcgcagctgagccgactacaacattatacaagtctcaacctttactt
gcggcccgggtcggtgaatacattggtcctcttggccaagagcttgtcattccaacgact
tctcttcttgatcaaagtaaagacagtgacaagtccaaggtccgtccaaacatctctcgt
cgaccttcagtatctgagacaaggatggggttgcctattcttgccgaggagcaatccatc
atcgagtcgattttgatgcaccccgtggtcattatctgtggtgagacaggtagtggtaaa
acgactcaagtgccccaaatgctttacgaagctggatttggatacaagggttcagacaat
cctggtatggttgctgtcactcaaccgcgtcgtgtcgccgccgtgtcacttgctgagcga
gtccgttccgagctcaatctccccccgaattcatcacttgttgcgcatcaaattcgatac
tcttccacaacctcgcctgataccgccatcaagtttatgacggacggtgtccttttgcga
gagcttgcatctgactttttgctcagccgatacagcgtggttgttgtcgatgaggcgcac
gagcgaggtgtcaacacagatgtcctcgttggtgtgttgagtagagtcgctaaacttcga
gagaaactgtggcgcgaaggcaagcaagacgtgaagcctttgcgtatcgttgtcatgtcc
gctactcttcgagtctccgactttgccgaaaaccccacattattctccaaacctccccct
gtaattcacattgctgccagacaacatccggtcaccgttcacttcagcagacgtactgtc
agtgattatgtgacggaggcgtacaaaaaagtttccaagatacatgcaaggctgccacct
ggaggtattttggttttcatgactggacaaggcgagatccaagcattgtgtaggaaattg
gagaagaaatatggcgccaaaaagtcatctcagaagactcaagtaatcaacgataattcg
ttgcctccagaagagcgcgaagccgaggaagttgaattcggaaaggatgaagatttggct
gcggacgtcgatgatggggccgcagagagcgatcctgaggcccttgataccgacgacgag
attgaaggtatcccaggcctcgaatttgatgaacctgcagacgctccgctgcatgttctt
cctctttactctttattacccaatgaccaacaaatgctcgttttcaaaccgcctcccgag
ggccacaggctcgtcatcatctctaccaatgtagctgagacgtctcttactatccccggc
atccgctacgtcgttgattctggccgtgccaaagagcgacattatgatcccatcaatggt
gtgcaatcattccaagtctcctggatttcaaaggcttcggcttctcaacgagctggccgt
gccggtcgtacaggaccaggtcactgctaccgtctctattcatccgctctctttgaggat
cattttgagcaattctccaaacccgaaatcttacggatgcctattgaaggcgtggtctta
caaatgaagagtatgaacatcgatgcggttatcaatttcccattccctacacccccagac
cgggcagccctccgacgagcagagaatctccttacaaacctcggtgccctttcgcttcct
actttgacaaagatgatcaatggcgtgcaacacaaaggttcaggcgggggtcagattacg
gacctaggcaaagctatggccgggtttcctgtgtcaccgaggttcgcgaagatgctggct
attggtacccagcacgactgcatgtcttatatcattgctatagtggcgggtatgtcagtg
ggcgatcctttcatacacgaacagtcgctagaggtggatgaagaggaagataaagtcgct
gagattagccatattaaaagtgaggatatcagggagaaggagcaacggaaggagacaaga
agacggtttttcaaggcgcaacagcaattcctggcgcttggacagggtaccagcgatatg
ttcaagctcctcgcggccatcggcgcctacgagttcgacccatcgcctgccttctgtgca
aagacttttatccgtctcaaggcaatgcaggagatacatcaacttcgagctcaaatatcc
tctattgccaaagtaccgctttcgaaattgcttccgcccagtgacactcaactgaaggtg
cttcgtcaaatccttgccgccggctttattgaccaggtagctgttcgcgaagacctcgta
ttgaagaagggtgtctcgtacgaatctactcgcggggtggcttaccgagcagttggactg
ggatccgagcccgttttcattcatccttcatccgccctcttccattgtgctcctccagac
tttgtcgtattctctgaaattgtcagaaccagcaaaccgtggatgaagggcgtaaccaaa
atcaatcctatctggttacctagtcttgggaagggcctttgcaccttctccaaaccaatg
gagatgccgacaaaagggtttgctagaaagagtggtttaaaggacgacgaaagagaagtg
tttgtcacgccgcatttcaaagacttgggaattgatcttccggtgatgaagaaaaagcag
aggagagaaggaaccaggtggattttggtggattga
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