Cryptococcus deneoformans JEC21: CNC02500
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Entry
CNC02500 CDS
T00243
Name
(RefSeq) ATPase, putative
KO
K10858
DNA mismatch repair protein PMS2
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03430
Mismatch repair
cne03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CNC02500
03460 Fanconi anemia pathway
CNC02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cne03400
]
CNC02500
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CNC02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
3256282
NCBI-ProteinID:
XP_024512397
UniProt:
Q5KKM6
LinkDB
All DBs
Position
3:join(713055..713073,713128..713241,713291..713377,713426..713640,713694..713899,713950..714111,714169..714368,714418..714497,714553..716045,716097..716272,716325..716476,716536..716571,716628..716744)
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AA seq
1018 aa
AA seq
DB search
MIGGIKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVD
NGSGIAEADWESIALRHHTSKLPSLEDLHKVTTFGFRGEALSALAALCDSITVVTATKET
APMGAVIKLGKDGRTIETSGRVARPRGTTVTLSGLFNPLPVRRKEFERNAKKEVSKALVL
LTAYALVPASASVQDARNGVRLKVELTAGGGRASKRSIHLMTDGRGQLRSSVGAVWGPSA
LDNVEDINLRLEVEIDRVMARREGITERKQTVEVKGLISSAQWGCGFSTSSRQFFYINGR
PCNLTKVARAINEVYKSFNTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSL
KTALESFFAPSRNTFTVEGASRTIKSIRRDHSHPSLKQSQRSQAINQTQQEDASLEEQGG
ERQVASDTEAFDNVIARRPLSRRCSQTTGSIPSSPHEEQMKGSITSAATLTSSLCELNEA
RLSSPSSQASLRQRSLSTSKPSLNPAQTVSAIQALNNCEAVSKDRMSKLRENSQGSTSQK
ATAKHESDDETQISVVEEQEVMEDMPEDANQDEGRNTEIVSPNHETPKISEGEAAVEAIE
IEDQTIETASGVQDHTIKHSTHANRPILEIESSTDENLLLSTRHSASAVWCGVDQQLSEQ
TSASPQHILSGSGRDLSIRTDPPPENRKIDFSTSCDPQRTSASSSSSPIVKPRVSQRLKP
DKAYRDEIISTAPQGEVIMRFDLSRLRKRFANAGNRQAGAQSKRVSQLVKQGDLEEAAGI
KNKDSELAEETLSRVISKADFEKMEVKGQFNKGFIIARLQSTDNGTDDLFIIDQHASDEK
YNFETLQQTTKIKAQALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDESKPAGKGER
ISLLAMPVSKETVFDFKDLEQLLHLLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKT
LTKGQMSQLLRNMGTIDQPWNCPHGRPTMRHLTKLNPAPESSKIKGRFDWTRWKEALA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggggaatcaaagctatcgacacctctttaattcatcgcatccattccggacag
gttgtcttagatctacaaagtgccatcaaggagctcttggagaacagcttggatgctggg
gcaacggccattgatgtacgaatcaaagacaacggtctagatagcatagaggttgtcgac
aatggctcgggcatagcggaggctgattgggaatctattgccctgcgacatcacacgtca
aaattgccgtctctagaagatctacacaaagtaactacctttggcttcagaggcgaagca
ctttccgccctggctgccctatgcgactcaattacagtagtgacggctaccaaggagacg
gccccaatgggggcagtaatcaaactcgggaaagatggtcgaacgattgagacttcagga
agggttgcccgaccgcgtgggacaaccgttacactatcaggtctctttaatcctcttcct
gtaaggcgaaaggagtttgaacggaatgcgaagaaagaagtgtcgaaagcgctcgtccta
ctgaccgcatatgccctcgtaccggcaagtgcctcggttcaggacgcacgaaacggagtc
cgtttgaaggttgaacttactgcagggggaggacgagcttccaaacggagcattcacttg
atgacggatggaagaggtcagctgcgttcttctgtaggcgctgtatgggggccttcagcg
ttagataacgttgaggatatcaatctccgtttggaagtggagattgaccgagtcatggct
cgtcgcgaaggaatcacggaaaggaagcagactgtggaggtcaaggggctgatttcatca
gcacaatggggctgtggattttcaacatcctcaaggcaatttttctacatcaatgggcgc
ccatgcaatctcacaaaagtggctagagcgatcaacgaagtctacaaaagcttcaacaca
aaccaactacctctcgctatccttgactttaagattcctactgagagtgtggatatcaat
gttagccctgacaaacgaacaattttcgtgcacagcgaagactgtctcatagattccctc
aagacagctttggagtcattctttgcaccgtcacgtaatacattcactgtggaaggagcc
agtcgcacgataaaaagcatccgacgtgatcattcacatccatcgctgaaacaaagtcag
cgcagtcaagcaattaatcaaacacaacaagaagacgcaagtttggaggagcaagggggt
gaacgccaagtagcaagtgacacggaggcattcgataatgtaatagctcggagacccctt
tcacgtaggtgctcccaaactaccggcagcatcccttcatctccacacgaggagcaaatg
aaaggatccataacttccgccgcaacattgacttcttccctttgtgaactgaacgaagcc
cggctctcttccccaagctctcaagcgtcacttcggcagcggtccctgagcacatccaaa
ccttccttgaatcctgcccaaacagtctccgccatccaagcgctcaataactgtgaggca
gttagcaaagaccgaatgtcgaagctaagggaaaattcacaaggcagcactagtcaaaag
gctactgcgaaacacgaaagtgacgacgaaacgcagatttctgtggttgaagaacaggaa
gtgatggaagatatgcccgaagatgcgaatcaagatgagggaaggaacacggaaatagtc
agcccgaaccatgaaaccccgaagatatctgaaggtgaggcagccgtagaggctatcgag
atcgaggatcagacgatagaaacggcgtccggcgttcaggatcatactataaaacattca
acgcatgcgaacagaccgatcctcgaaatagaaagttccactgatgagaatttactcctt
tccacacgtcattccgcttctgcggtgtggtgcggagtggaccaacaactgtctgagcaa
acatcggcttctcctcaacatatcctttctgggagtggccgtgacttgtctattaggact
gatcctccacctgaaaatcggaagattgacttttctacctcgtgtgatccgcagcggaca
tctgcctcttcgtcctcttcacctatcgtcaagccgagagtctctcaacgtcttaaacct
gataaagcttaccgggatgagattatctctacggctccacaaggtgaagtcattatgcgt
ttcgacttgtcccgcttgcgcaagagatttgcaaatgcaggaaatcgccaagcaggagcg
cagagcaagcgtgtatcacagcttgtaaaacaaggcgatttagaggaagcagccggtatc
aaaaacaaagactcggaactcgcagaggaaaccctttcaagggtaatctcgaaagctgac
tttgagaagatggaagtcaaggggcagtttaataagggattcatcatagcaaggttacaa
tcgacagataacggaacagatgatctttttatcatcgaccaacatgcttcagacgaaaag
tacaactttgaaaccttacagcaaacaacgaaaatcaaagctcaggctcttatcaaacct
cgggcgcttcatctcacggctggcgatgaaattgttgctatggaaaatattgacatcctc
aatgccaacgggtttgatgtccatgttgatgagagcaagcctgcggggaagggtgagaga
ataagtcttttggcaatgccagtaagcaaagaaaccgtatttgattttaaagatttagaa
cagctacttcacctgttgtctgatgactcccgaccatcaggacagatggtccgttgcatg
aaagccagggcaatgtttgccagtagggcttgcaggaaaagcgtcatgatcggaaaaact
ttgacaaagggccaaatgtctcagctactacgcaatatgggtaccatcgatcagccatgg
aattgccctcacggtcgtcccacaatgagacatcttaccaaattgaacccagcaccagaa
tcaagtaaaataaaagggagatttgactggaccaggtggaaagaggctctggcgtga
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