Cryptococcus deneoformans JEC21: CNC02980
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Entry
CNC02980 CDS
T00243
Name
(RefSeq) small nuclear ribonucleoprotein hPrp3, putative
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNC02980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CNC02980
Spliceosome [BR:
cne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CNC02980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Adeno_PIX
Motif
Other DBs
NCBI-GeneID:
3256140
NCBI-ProteinID:
XP_569946
UniProt:
Q5KKH6
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All DBs
Position
3:join(957809..958213,958261..958775,958833..959286)
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AA seq
457 aa
AA seq
DB search
MGGDAQQPAAQADRNEKRAMRDRYKTMAPKFTSVRANASAAASQAPSRASPAVTAAPVLN
PYASASAANSPAPDEERAPTRKSKKLQFSRAGKYVEQGEQLRNEQKMEALRQRIAEASRK
AGLDSEFDTLERSLKRQPPPAVEWWDEAILPKGVTYEDDLESAYNNLSTSSDSLITHLVL
HPIPIPAPMDRRQPERGLMLTKKEQKKMRRQRRQAELEDKRDRQKMGLLPPDPPKVRLAN
LMKVLTSDAVQDPTKVEAKVRKEVAMRAYKHEKDNQERKLTAEERKEKEYSQMVARERNG
IRGAVFKIKYLTNGRHKFKVRETAKADLLSGICIFHPSFALVMVEGVEKSIKHFKRLMLS
RIDWTEQARPMADGDGGEDAPGSDEDMDGRTNSKEGEQDLADNKCELIWEGELPERVFKM
FRARHVETDSKAKEWLTPRFEAMWDLAKRWQWAGEDL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgatgctcagcagcccgccgcccaggcagacaggaacgaaaagcgggccatg
cgcgaccgctacaagacgatggcgcccaagttcacgtccgtgagggccaacgccagcgcg
gccgcatcccaggcgccgtcccgggcctcgcctgccgtcaccgcggcgccggtgctcaac
ccgtatgcgtccgcgtcggccgccaactcgcctgcgccagacgaggagagagcgcccacg
cgcaagtccaaaaagctccagttcagcagggcgggtaaatatgtcgagcagggcgagcag
ctgaggaacgaacaaaagatggaggctctgcggcagaggatcgcagaggccagccggaag
gctggtctcgacagcgaattcgataccctcgaaaggagtctcaagcgacaacctccgccg
gccgtcgaatggtgggacgaagccattcttcccaagggcgtcacgtacgaagacgacctc
gagtctgcctacaacaacctgtccacctcgtccgactctctcatcacccacctcgttctt
catcctatccctatccccgcccccatggaccgcagacaacccgagcgcggtcttatgctc
accaaaaaagagcaaaagaagatgcggcgacagcgacgccaggctgagcttgaagacaag
cgcgaccgtcaaaagatgggtttgctgccgcccgacccgcccaaggtcaggctcgctaac
ctgatgaaggtgctgacctcggacgccgtccaagatccgacaaaggtggaggccaaggtc
aggaaggaagtcgcgatgagggcgtacaaacatgaaaaggataatcaagagcgaaagctg
actgcggaagagagaaaggaaaaggagtatagtcaaatggtcgccagagagaggaatggt
atccgcggtgccgtcttcaagatcaagtatctgaccaacggccgacacaaattcaaagtc
cgcgaaaccgccaaagccgatctcctttccggtatctgcatcttccatccctcctttgcc
ctcgtcatggtagagggagtcgaaaagtccatcaaacatttcaagcgtctcatgctctca
cgtatcgactggaccgaacaagcgcggcccatggctgacggtgacggcggcgaggacgcg
ccaggttcggacgaagacatggacggccgcacgaacagcaaggagggcgaacaagacttg
gcagataacaagtgtgaactcatttgggaaggcgagctgcccgagcgcgtgtttaaaatg
tttagagcgaggcatgtcgagacggatagcaaggcgaaagagtggttgacgccgaggttt
gaagccatgtgggatttggccaaaaggtggcagtgggcaggggaggacctctag
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