Cryptococcus deneoformans JEC21: CNC03250
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Entry
CNC03250 CDS
T00243
Name
(RefSeq) transcriptional elongation regulator, putative
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNC03250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNC03250
03110 Chaperones and folding catalysts [BR:
cne03110
]
CNC03250
Enzymes [BR:
cne01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CNC03250
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CNC03250
Chaperones and folding catalysts [BR:
cne03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
CNC03250
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rotamase_3
Rotamase
WW
Rotamase_2
WW_1
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
3256124
NCBI-ProteinID:
XP_024512433
UniProt:
Q5KKE8
LinkDB
All DBs
Position
3:complement(join(1025649..1025735,1025799..1025993,1026044..1026298))
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AA seq
178 aa
AA seq
DB search
MSSTGWEIRFSNSRQIPYFYNSERSISTWEPPSELSAEQIQQLPGAAKYMNVQLAQPAGG
KEGQVRASHILAKHAGSRRPASWRNDKITITSDEAQAIIEQHIAYLQSLPPADLPKEFAK
IASTESDCSSARKGGDLGWFGRGQMQKPFEDATFNTPVGQLSGIVKTDSGIHVILRTG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaccggttgggagattcgtttctccaattctcgtcaaatcccctacttctac
aactcggaacgtagcatctccacttgggaacccccttctgaactcagcgcagagcaaatt
cagcaattgcctggcgcggccaagtatatgaatgtacagttggctcaacctgcaggtggc
aaggaaggtcaggtgagggccagtcatatcctggcaaagcatgctggaagcaggaggccc
gcttcatggagaaatgataagatcacaatcacttccgacgaggctcaagctattatcgaa
cagcacatcgcatatcttcaatccctccctccggctgatcttcccaaggaatttgcaaag
attgcctcaacagagagcgattgttcaagcgcgaggaagggtggtgatcttggatggttt
gggaggggacaaatgcaaaagccctttgaggacgcgacgtttaacactcctgtcgggcag
ctgagcgggattgtcaagacggactctggtatccatgtcatcctgcgtactggatag
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