Cryptococcus neoformans var. neoformans JEC21: CNC03670
Help
Entry
CNC03670 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cne03036
]
CNC03670
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CNC03670
microRNA pathway
RISC loading complex
CNC03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Motif
Other DBs
NCBI-GeneID:
3256520
NCBI-ProteinID:
XP_024512412
LinkDB
All DBs
Position
3:join(1159008..1160411,1160467..1160739,1160805..1160880,1160938..1161002,1161070..1161087,1161139..1161327,1161403..1161640,1161709..1161890)
Genome browser
AA seq
814 aa
AA seq
DB search
MATKSRCNYRWESRKLLIKDELPQGHGSGDYAYRTTPQFWKECPPFAPGERVHAAVLLLS
PTAEKTFGHPECRPMCLLTSRPLPLFETHDTVEVNLGVGEQPTHRGCVRMTSAGSLEGGL
DDVTLGQTLRFTERLMRAELQRLIKADLHRIKWLLLPLTYGYSSARQPGPLAREDIAWEQ
VEAVANGPLTVPFTLKDEDDLAAQCFDAMASANSELTRRSYITAVRQDLNPDSPHPERPE
KTILQVIQGENCLFPQLVHRKQPILQVETACLAKNGSYITTSATPAEQRSTQFLIPEYEN
RHCIPASIFRALTPFPFFIHQLECMLIAYEMSTKLFGSLLHPELALQALTAPSSQNVTPW
TYERLEILGDTLLKFFITIHVYLHGGGANSREDSLKVWQDRHKLVSNRTLTANAIKLGLV
EFVRDKRLKVKEWVPRDWELELLPGQIAPKKAVQTSNDGPEMRKLGDKLLADIVEAIIGA
SYGRDKNFDNVISTLIHLNVPLDLFSTWEEIKHVLPLSDDEHDTEEHGAADAETETDSFS
ACEILGYKFKRKRRYEDVISMSNQPHARRIRENYKMLGNAVLDLHVIEFLLAKYPEEGPG
SLSNMKTFRTTEGLRCALATELGLQDLLKDGDERAERELGRATYFMRDAKAQADAGLSDE
EQGGIHYWDGVAVNHFTGSIIEVIYGAIFQDSGFSLEHTQRIFDNHIVPFIEKYCKGPSA
SDLHPKGLLTRWMQAKGCAYWKLDAVGPKLCEGVVTCHDQDVARCKAFTTHVAVRNVCEE
AIKRLRDENRIKDICDCPSFKEIVPEDKTFGKWR
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaagtccaggtgcaactatcgctgggagagcaggaagctcttgatcaaggac
gagctgccgcagggacacgggagcggcgactatgcgtaccgcaccactccccagttctgg
aaggagtgcccgccctttgcgcccggagaacgggtgcatgccgcagtgctcctgctctca
ccgacggccgaaaagacgtttggccaccccgagtgcaggcccatgtgcttgctcaccagc
aggcccttgccgctgttcgaaacgcacgatacggtcgaggtgaatctcggcgtaggggag
cagcccacccaccgcggctgcgtgaggatgaccagcgccggatccctggaaggcggcctc
gacgacgtcacgctcggccagacactgaggttcacagagcggctgatgagggctgagctg
cagagactcatcaaggcagatcttcatcgaatcaagtggctgctgcttcccctcacgtac
gggtactcttccgctcgacaaccaggcccgttggcgcgtgaggatatcgcttgggagcaa
gtcgaagctgttgccaatgggcccctgacagttccgttcacccttaaagacgaggacgac
ctcgccgcgcaatgtttcgatgccatggcctcggcgaattctgaactgacccgccgaagc
tacattactgctgtccgtcaagacctcaatcccgactctccccatccggagcgacctgag
aagacgatcctgcaagtgatccagggcgagaactgtctgtttccccagcttgtacaccgc
aagcagcccatcctccaagtcgagacggcgtgtctcgccaaaaatggctcatatatcacc
acctctgccacgcctgccgagcagcgctcaacgcagttcctcattccagagtatgaaaat
cgccactgtatccccgccagcatcttccgcgccctcaccccctttccctttttcatccac
caactcgaatgcatgctcatcgcgtacgaaatgtcgaccaaactgtttggatcattgctc
catcccgaactcgctctccaagctctcacagccccttcctcgcaaaacgtcaccccatgg
acctatgagcgcctcgagatccttggcgataccctgctcaaattcttcatcaccatccac
gtctatctgcacggtggaggcgcaaactctcgtgaagactcgttgaaagtgtggcaggat
agacacaagcttgtcagtaaccgtacactcaccgccaacgcaatcaagctcgggctggtg
gaattcgtgagagataaaaggcttaaagtgaaagagtgggtaccacgagattgggagcta
gagctgttgccggggcagattgcgcccaagaaggctgtgcaaacaagtaacgatggtcca
gaaatgaggaaactgggagataagctcctagcagatattgttgaagccatcattggagcc
tcgtatggcagggacaagaactttgacaatgtcatctccacattgatacatctcaatgtc
cccctcgatctttttagtacttgggaagagatcaaacatgtgcttccactgtcggatgat
gaacatgataccgaagaacatggggctgccgatgccgaaaccgaaacggactctttctca
gcatgtgaaatcctggggtacaaattcaagcgtaaaaggaggtacgaggatgtcattagt
atgagtaatcagcctcatgcgaggaggatccgcgaaaactacaagatgctaggtaatgca
gtcttggatcttcacgtcattgaattcctgctggcaaagtaccctgaagaaggacctggt
tctttatccaacatgaaaacgtttcgtaccacagagggacttcgatgcgcgctagcgact
gagctaggcctacaagacctcctcaaggatggtgatgaaagggcggagagggaactgggt
cgcgcgacatactttatgcgcgacgcaaaggctcaggcggatgctggcctttcagacgaa
gaacagggaggtatacactactgggatggtgtcgctgtcaaccattttacgggaagcatt
atcgaagtcatctacggtgctattttccaggactctggtttttcccttgaacatacccag
aggatattcgataaccacatcgtgccttttatcgagaaatattgcaaaggtcccagtgca
agcgatcttcacccaaagggcttgttaactagatggatgcaggccaagggctgtgcatat
tggaaactagatgcagtcgggccgaaattatgcgagggtgtcgttacctgccatgatcaa
gatgtggcgcgttgcaaggctttcactacgcatgtggccgtgaggaacgtatgtgaagaa
gctataaaacgtttgcgagatgaaaaccgaatcaaagatatttgcgactgcccgtcgttc
aaagagatcgtccccgaggacaagacgtttgggaaatggagatga
DBGET
integrated database retrieval system
