Cryptococcus neoformans var. neoformans JEC21: CNC03890
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Entry
CNC03890 CDS
T00243
Name
(RefSeq) transcription initiation factor TFIIE alpha subunit, putative
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNC03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNC03890
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
CNC03890
Prokaryotic type
Archaeal type
TFE
CNC03890
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_9
HTH_24
ADK_lid
Motif
Other DBs
NCBI-GeneID:
3256379
NCBI-ProteinID:
XP_569626
UniProt:
Q5KK86
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All DBs
Position
3:complement(join(1206665..1206691,1206745..1206818,1206870..1207891,1207941..1208068))
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AA seq
416 aa
AA seq
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MSNPQLSSDEIQKLCSDLVYQVAYSFYDVPYIIILKMLVQYNVMTEIDLGQRVGLSPNEV
RKYMGTLHLHRLVKRHVNREKQILPEWKKSQLSTQAMRQSYSSNKPPIGDSRTRDVHYWY
LDYREFANVTKYRLAMMRKGIDERIKSEVGQRGYQCPQDGRVYDTLDVGHLFDPTTSTFR
CEDCQAELIEHDPTIDQENNSSLQDMMQRFNIATAPIRDALKAVEVLTLPSTNVIAWIAQ
NVKTGVVSVNGQEGGEDSKKFEVVIGGEDDEAKEKLAQAQREQNALPEWYTHSTVTGDAT
TLGINDINQRAKVAERAKHVGDHETEVGDQALAAHYELLDEEDDVEEVGVDINEGVQLDT
VERRDEAEVEEVPAGESLGKTVFVNGQMKKIEDVTEDDQELMTSEEYEAYAQAMYG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcctcaactctcctcagacgaaatacagaaactttgctctgatctcgtatat
caagttgcatactccttctacgatgtgccctacatcattatcctcaaaatgctcgttcag
tataacgtaatgacagaaatcgatttgggtcaaagggtagggctctctccaaatgaggtc
aggaaatacatgggtactcttcaccttcatcggctcgtaaaacggcatgtcaaccgcgaa
aagcaaattcttcccgagtggaaaaaatctcagctctccacccaagctatgcgtcaaagt
tattcttctaacaagcctccaattggtgatagccgtacccgcgatgtccattactggtac
cttgactaccgtgaattcgccaatgtcacaaaatatcgacttgcaatgatgcgtaaaggg
attgacgagcggataaagagcgaagtgggccagaggggataccaatgcccccaggatggg
agggtgtatgacacgctcgatgtgggacatctctttgatccaacaacaagcacattcagg
tgtgaagactgccaggcggaattaattgaacacgatcccacaatagaccaggagaacaat
tcgtcactccaagatatgatgcaacgattcaacatcgccaccgcacccataagggatgcg
ctcaaggctgttgaagtgcttactctccccagcaccaacgtcatcgcatggatcgcacag
aatgtcaagaccggcgtggtcagtgtgaatggacaagagggcggagaagatagcaaaaag
ttcgaagttgtcattgggggggaagacgacgaggccaaagaaaaactcgcacaagcgcag
agagaacagaatgctctgccggaatggtatactcattctactgtcacgggcgatgccaca
acacttgggatcaacgatataaaccaaagagcgaaagtcgccgagagagccaaacatgtc
ggcgaccacgaaacggaggttggggatcaggcccttgctgcccactatgagcttttggac
gaagaggatgacgttgaggaagttggagttgatataaatgaaggggttcagctggatact
gttgagaggagagatgaagcggaagtggaagaggtgcccgcgggagaaagtttaggaaag
acggtctttgttaatggtcaaatgaagaagatagaggacgtcacggaagacgatcaggag
ctgatgacttctgaagaatacgaggcatacgcgcaagctatgtatggctga
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