KEGG   Cryptococcus neoformans var. neoformans JEC21: CNC03920
Entry
CNC03920          CDS       T00243                                 
Name
(RefSeq) DNA supercoiling, putative
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CNC03920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNC03920
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     CNC03920
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ZGRF1-like_N COE1_HLH
Other DBs
NCBI-GeneID: 3256676
NCBI-ProteinID: XP_024512565
UniProt: Q5KK83
LinkDB
Position
3:join(1212230..1212567,1212615..1212640,1212715..1212787,1212837..1212938,1212987..1213391,1213440..1213518,1213570..1213687,1213738..1213768,1213835..1213903,1213952..1214012,1214062..1214106,1214165..1214178,1214232..1214356,1214405..1214589,1214641..1214713,1214760..1214879,1214922..1214956,1215011..1215399,1215450..1215482,1215539..1215580,1215637..1215785,1215847..1215912,1215961..1216130,1216196..1216216,1216272..1216694)
AA seq 1063 aa
MTIGTIKPRRSLGAIIDSIPSQQEYVPDSCSENSGSDSERDAPIPTLKPIPLTPLPPRSA
RLISELGADPIKIGKKNEREEARAVPGDGKIDTKVHGAVDTLLAPVLYFAVQWRKPQFKK
HKTWDGDANIKVEGNRIVMLDEDGNQMAATNVGDKVIKPEAEFKIGGYEIMVDHVLQQDQ
FKASTSILNRPKVIPTIKSTGYRPASFTKPFRPPIQKANLTPAKPSTMEIVNNEQHQSPI
SSSSKRSIPTPAAAQRAVAASSFYTRQSPKPFNERIVLGEKSNKERLQWGGALFNPHAEG
AVVMPRPGEKLAKLKGTTIVDVVLDPVLGNLLRDHQKEGVKFMYSCVMGMTGAEGEGCIL
ADEMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVDNWRKEFKKWVDRRVN
VLVADGTDYRVSSFVNNKHQHVLIIGYERLRKVVKELASCIPPIDLIVCDEGHRLKSKDN
KTIKMFDMLKTQRRIILSGTPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRT
PNCSAKDVELGRERANDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSN
LLDPNIVGSFIRGYGAQSLALIDLMRKISNSPMLLKRRDDELARANDDLGSATSAAISAI
PSDANINDVTTSGKMLMLDKMLHSIYQCTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRL
DGSTPPKQRQELVDRFNKDKGRQESFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDL
QAMARIHRDGQKRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRTEKQTSKDSFS
AAELRDIFTLNVRTDGCQTHDLLGCQCTRKPVGETRDIAEGEHNSKDLPDNASEESDNDE
NDHPTFVSANKYDPEPTPKMRRKAIQEQKNKLAALKHWAHFDPFEPASFRGIQDSLLYNV
LFDSWETDSAPLSQNIKTYGSLAFESPHERHEDDLDSDEEVLVPKKRKSGIVRSGVMLKK
ARAADEENTGFSQRRHNLRSIAESGGTGRVTFVFEKISKSTIA
NT seq 3192 nt   +upstreamnt  +downstreamnt
atgacaatcggaacgatcaagcccaggcgcagtctcggtgccatcatagactctattcct
agccaacaggaatatgttccagattcttgctcggaaaactcaggctccgattcagaacga
gatgctcccattccaactctcaaacccataccactcacgcctttacctcccagatcagca
cgcttgattagcgaactaggggccgaccccataaaaatagggaagaagaacgaaagagag
gaggctagagctgtacctggtgacggcaaaatagatacgaaggtccatggggctgtcgac
actttattagcgccggtattgtattttgccgtgcagtggaggaaaccccaatttaagaag
cataaaacttgggatggggatgccaacatcaaggtagaaggtaacaggattgtaatgctt
gacgaggatggaaatcaaatggccgctaccaatgttggggataaggtgatcaagccagaa
gccgaatttaagatcggtggatatgagatcatggtagatcatgtattgcaacaggaccaa
ttcaaagctagtaccagtattctcaacagacctaaagttatcccaacaatcaaaagcacc
ggctaccgacctgcatcattcacaaagccctttagacctcccatacagaaagcaaatttg
accccagcaaagccatcaactatggaaattgtcaacaatgaacaacaccagtcgcccatt
tcctcatcttcaaagcgctccatcccaacacccgcagccgcccaacgagcagttgctgct
tcatcattttatacgagacaatcacctaaaccattcaatgaaaggattgtattgggagag
aagagcaacaaggagaggctacaatgggggggagcgttattcaaccctcatgctgaaggt
gcagtggtgatgcccaggcctggggaaaagctggctaaattgaaaggcacaaccatcgtg
gatgtggtgcttgaccccgtcttggggaacttattgcgggaccatcagaaagaaggtgtc
aaatttatgtactcgtgtgtcatggggatgaccggtgcggaaggcgaaggatgcatcctt
gcggatgagatgggtttgggcaagacgcttcaaacaatagcactcatttacaccatgctg
aagcagtctccctttgccaatcaaacatccattatcggcaaagcgatcattgtgtgtccg
gtaacgttggtggacaattggcgcaaagagttcaagaaatgggtggataggcgagtgaac
gttctggtggccgatggtacagattatagggtatcgtcttttgtcaacaacaagcaccaa
catgttctgatcattggttacgaaaggcttcgcaaagtcgtcaaagaacttgcttcgtgc
attccgccaattgaccttatcgtctgtgacgaaggacatcgcctgaaatccaaagacaat
aaaacgataaaaatgttcgatatgctcaaaacccaacgccgtattatcttatcagggacg
ccagtacagaacgatctaggtgaatattgggcgatggtcaattttgcttgtccgggtgtg
ttgggaaaatactcggctttcgcaaagcattatgaaaagccaatattaaaaagcagaaca
cctaactgttcagcgaaagatgtagagctaggcagggaaagagcaaatgatttagccaag
ttgtccaaggagtttgtcctgcgaaggacggctgcagtgcttgaaaattatttgcctccc
aagtacgagtacgtaatttttatcgccccatcccttcttcagctttcggtcctttcaaac
ctcctcgaccctaatatcgtcggaagcttcatccgaggctatggtgcgcagtcattagct
ctaattgatctcatgaggaaaatttccaattctcctatgcttttaaaacgaagagacgac
gaattagcacgagcaaatgatgatttaggctcagccacctcagcagcaatctctgctatc
cctagcgatgccaacatcaacgatgtgactacgtctggcaagatgctcatgcttgacaaa
atgctccattccatctaccaatgcactgaagaaaaagttgttgttgtgtctaactggact
tctacacttgacttgatccaaggattatgtaaactgaagaggtacaattatctcagactt
gatggtagtactccgccgaagcagagacaagagctagttgataggttcaacaaagacaag
ggaagacaagaaagttttgtttttctgcttagtgccaaagctggcggagtgggactcaac
ctgattggtggatcgaggttgattttgttcgacagcgattggaacccctccaccgacctc
caagctatggcccggatacatcgcgacgggcaaaagcgcccagtctatatctatcgcttt
ctcactactaacgccatcgatgagaaaatctatcaacgtcaaattactaagacggggcta
tcagaccagatgatggatcaaacgcgtacagagaaacagacgagcaaagattctttctcg
gcagcagaattgagggacatattcaccctgaatgtacgaacggacggttgtcaaacacat
gatttgttgggttgtcagtgcacgagaaaacctgtaggcgaaacgagggacattgcggaa
ggggagcataattcaaaggacctgccagacaatgcgtctgaggaaagtgataatgacgaa
aacgatcatcccacttttgtcagtgccaataaatatgatcccgaacccactcccaaaatg
cgtcgcaaggccattcaagagcaaaaaaacaaactcgccgcgctgaagcactgggcacat
ttcgatccttttgaacctgcatcattccgtggcatacaagactctcttctgtataacgta
ctgttcgattcgtgggagactgatagtgcccctttatcccaaaacatcaaaacatatggc
tctctggccttcgagagcccccatgaaaggcatgaggatgatcttgactcagatgaagaa
gttttggtacccaaaaaacgcaaatctgggatagtaagaagtggagtcatgctgaagaaa
gcgagggcagcggacgaggagaatacggggttcagccaaagaaggcataatctgagaagc
atcgcggaaagtggaggaactgggagagtgacatttgtgtttgagaagatatcaaaaagt
accatagcctaa

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