Cryptococcus deneoformans JEC21: CNC04800
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Entry
CNC04800 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNC04800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cne03400
]
CNC04800
Enzymes [BR:
cne01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
CNC04800
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
CNC04800
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
CNC04800
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
CNC04800
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
CNC04800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2HE
DcpS_C
HIT
Motif
Other DBs
NCBI-GeneID:
3256491
NCBI-ProteinID:
XP_024512601
UniProt:
Q5KJZ8
LinkDB
All DBs
Position
3:complement(join(1447956..1448141,1448196..1448355,1448412..1449013))
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AA seq
315 aa
AA seq
DB search
MSWTMGNCLSVPVSSSNSSSNNIQLPPRRPISSSLSSNNTLSSTSYPVPKKGKNHAQSFH
RRRTSESSQMASHPLLALRQYATLPNPQSSLPPSKLLFSNSNTMVVFDSYPKAKYHFLVL
PRYPFPPQSDPDSDESIVSIETLDDLKSLLRKAGADQREEVLRAMAETAREVEEMIRDEM
LKTEGFEWKIDVGFHAIPSMKHIHLHVISEDRISPYLKSKKHYNSFRPDLGFFIPIMEVQ
RWLQDDRTVLDRVEALPATQTLLKTPLTCFKCDEPMNNIEKLKQHFEKEFSSERKEAFKY
IAKHGRQRSSEEEIF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggacaatgggcaactgcttatccgttcctgtatcatcctcaaactcttcatca
aataacatacaactgccaccccgacgccctatctcttcttctctctcttcaaataacact
ctatcatctacgagttatccagtacccaaaaagggcaaaaatcacgcacaatcgtttcac
cgccgtcgaacctcagaatcctcccagatggcttctcacccactccttgccctgcggcag
tatgccacactccccaatcctcaatcttctctcccaccatcaaaattgcttttctccaat
agcaatacgatggtagtgtttgactcttacccaaaggcaaaatatcatttcctagtccta
ccgcgttatcctttcccacctcagtcagacccagattccgatgagtccattgtttcaatt
gagacgttggacgatttaaaaagcttgcttcgtaaagcaggagcagaccagagagaagag
gttctaagagccatggcggagactgcgcgcgaagtggaggagatgattagagacgaaatg
ctcaaaaccgaaggatttgaatggaaaattgatgttggattccatgctataccctcaatg
aagcatatacaccttcatgtcatatcagaagatcggatatcaccttatctgaaatcaaaa
aaacactacaactctttccggcccgatcttggtttctttatcccgatcatggaagtgcaa
cgctggttgcaggatgatcgcaccgtgcttgatcgtgtagaagcattgcccgctactcaa
acattactgaaaacccctttgacctgcttcaaatgcgatgaacccatgaacaatattgag
aagttgaaacagcatttcgaaaaggaatttagcagcgaaagaaaggaagcttttaaatat
atagcaaaacatggccgtcaaaggagcagtgaagaggagattttctga
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