Cryptococcus deneoformans JEC21: CNC05820
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Entry
CNC05820 CDS
T00243
Name
(RefSeq) tRNA-intron endonuclease, putative
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cne03016
]
CNC05820
Enzymes [BR:
cne01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CNC05820
Transfer RNA biogenesis [BR:
cne03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CNC05820
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Nop25
Motif
Other DBs
NCBI-GeneID:
3256439
NCBI-ProteinID:
XP_569802
UniProt:
Q5KJP3
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All DBs
Position
3:complement(join(1725557..1725589,1725679..1725819,1725935..1726076,1726174..1727122,1727220..1727556))
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AA seq
533 aa
AA seq
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MAQQQPQLKLPPRARYAANNRKYGTPLPILFPSSSSASSKSILTSFLPSLSSARVEIQHI
TGEYDPTTGSVWITDPKMMDLAFQKGFFGKGSLSRSEPSWRSRRIGLLKGGDTLAAEQMR
EKRRLERKQFKIDRAQAMLDAAKKAEAIVAAAKSQPEPKAQSQLQPGDNEGDDVEDGEGE
GDEADVSLVVTPDNEVDLEGEAETQSQLPAGGEALASQSQIEIDPLSLTPQTFLVRPTRP
DANRNRGRNAFRRRPPQSQAQAQVQDNTDTSVATPAVVTAPSTEQTTQAPADADVDMEAE
EDLFDESLVEEMEYLQLSIEESLFLSLAIGVLRVYDPSTGMYLTPTSNSADAGELLKLLL
PRPSPSSPLSAQLSVSEGKGAPLLPDNPALVSYAVYHHFRSLGWVVKDGIKFCVDWLLYR
RGPVFSHSAFACVIIPVYADTHDQAVSPYGGEDWYEEKMSWKWMNTVIRVNALVQKNVIA
VYITIPPISSFPSNLKLADGTLDPKKNDLKSLLKSYTIREVALTRFGATRRRD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacagcaaccgcagttgaaacttccaccgagggcccgatacgcagccaataac
cgtaaatacggcacacctctgcctatcctattcccctcttcctcctccgcatcttccaaa
tccatcctcacatctttccttccgtctctatcctctgctagagttgaaatccagcatatc
acaggcgaatatgatccaactacaggaagtgtatggataacagacccgaaaatgatggat
ttggcttttcaaaaaggtttctttgggaaaggtagcctgagtaggagtgaaccgagttgg
cggtcgaggaggattggattgttgaaaggtggtgatactctagcggcagagcaaatgcgc
gagaagaggcgattagagcgtaagcaattcaagattgatagggcgcaagcaatgctggat
gcggccaaaaaggcggaagccatcgtagcggctgcaaaatctcaaccggaaccgaaagcg
caatctcaacttcaacctggtgataacgaaggggacgatgtagaagatggcgaaggagaa
ggggacgaagcagacgtctcgctcgtggtcactcccgataatgaggtcgacttggaggga
gaagcggaaacacaatcacaattaccagccgggggagaagcattggccagccaaagccaa
atcgagattgatccactcagcttgacgccgcagacgttccttgtccgaccgacaaggccg
gatgcgaatcggaatagggggagaaatgcttttcgtcggcgaccccctcaatctcaggct
caagctcaggttcaggacaatactgatacatctgtggccactcccgccgttgttaccgca
ccctcgaccgaacaaactacccaagcccccgccgacgctgacgtcgatatggaagccgaa
gaggacctatttgacgaatccctcgttgaagagatggaatatctccaactctccatcgaa
gaatccctcttcctctccctagccatcggggtgcttcgtgtgtacgatccttccactggc
atgtacctcaccccgacatcgaactctgcggatgcaggcgagctattgaaattgctcctc
cctaggccctcaccgtcttcacctctttctgcccaattgtctgtctctgagggtaaagga
gcaccgttattgccggataaccctgcactagttagttatgcggtgtaccaccatttcaga
agtctgggctgggttgtgaaggatggcatcaagttctgtgtagattggcttttgtaccgc
cgaggaccagtgttttcccattctgctttcgcgtgcgttatcatccctgtgtatgctgat
acgcatgaccaagcggtttcaccgtatgggggggaggattggtatgaagaaaagatgagt
tggaagtggatgaacaccgttatcagggtgaatgcgctcgtacaaaagaacgtcatcgca
gtttatatcactataccgcctatttcttccttcccatccaacttgaagttagcggatggc
accctcgatccaaagaagaatgatctcaagagtctgttaaagagctataccattcgagaa
gtagcgcttacgaggtttggagctacaagacgacgtgattag
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