Cryptococcus deneoformans JEC21: CNC06110
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Entry
CNC06110 CDS
T00243
Name
(RefSeq) rRNA primary transcript binding protein, putative
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNC06110
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
90S particles
Other 90S particles
CNC06110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_MUD2_C
F07F6_N
RRM_11
RRM_10
RRM_7
DUF8400
HDPD
Motif
Other DBs
NCBI-GeneID:
3256715
NCBI-ProteinID:
XP_024512510
LinkDB
All DBs
Position
3:join(1795083..1795084,1795129..1795678,1795737..1796174,1796227..1797480)
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AA seq
747 aa
AA seq
DB search
MSRLIFLNLPSTLNPDTFRKTLLSPATLKSTTITDTKLVPKRRFAFVGYKDAEEAQKVKE
WFDGTYAFGGGKVKVDFVKDEPLKTGDKLNRGEKSKEKRSKEGRDNVQEKQEPNKRLQEF
MSVMKGVDPAMASPEASTSTAEGTKKEKSVKGKEKSEEPEEAEADDDDAAWLRRRQAALE
GEPSTPQLSADEQLILSTSRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPL
GTAFLQFHNAEDALAAYKALDKTIFQGRLLHVLPGRAKPGQEGAAAGSGVVDGKVLGKRD
EGRGEVKSKVDAKRKQESAKGVNWASLYMNSDAVAASVADRMGISKSELLNADSGNSAVK
LALAETTVIEETKKYFEEAGIVLESLQPRVPRSQTTILVKNIPYGTSIQSLTDLFAPHGK
LTRVLLPPAGTLGVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMFKSETAPGVGP
ISTEQKREEEAKALAEKVESLPEQPDPTDEAGSTLFLKGLNFTTTTPHLQTVLSHIPGFS
FARVQMKPDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFAQRGAED
DRETKKGGDAEGGKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGA
QSTRGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWANEGEEVDIKGLREKVKGEVRG
MEDGGDRKRRKLDFKGGKEDEMDGLEV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcctcatattccttaaccttccctcgacgctcaaccctgacacctttcggaag
accctcctctcccctgctaccctcaaatcaacgacaattaccgatacaaaacttgttcca
aagagacgatttgcttttgttggctacaaggacgcagaagaagcccagaaagttaaagaa
tggtttgatgggacgtatgcgtttggtggtggaaaagtcaaggtggactttgtaaaggat
gaaccactcaagactggggataagctaaatagaggcgaaaagagcaaagagaagcgttca
aaggagggcagggataatgttcaagagaagcaggagccaaacaagagacttcaggagttt
atgagtgttatgaagggcgttgatccggcaatggcttcgcctgaagcgtctacctctact
gccgagggtaccaagaaggagaagagcgtaaaaggaaaggagaagtcggaagagccagag
gaagctgaggcagacgatgacgatgctgcatggcttcgacgacgtcaggctgctcttgaa
ggcgaaccatctactcctcagctatccgcagatgaacaactcatcctctccaccagccgt
cttttcgtacgaaatctcgcatttattacaacctccgaatctctctcatcacatttctcg
acttatgggcgtatagacgagtgtcacctccccgtctctcaaacgactggtgaaccgctc
ggtacagccttccttcagttccacaacgccgaagacgcacttgcggcgtataaagctttg
gataaaacgatttttcaaggtaggctgttgcatgtcttgcctggaagggcaaagccggga
caggaaggtgctgccgcaggaagcggggtggtagatggtaaagtgctgggcaagagggac
gagggaagaggcgaagtcaaaagcaaagtggatgcgaagaggaaacaagagagtgccaag
ggtgtcaactgggcttcgttgtacatgaacagtgacgccgttgccgcctctgttgccgac
cggatgggtatctccaaatccgagcttctgaacgccgactctggcaactctgccgtaaaa
ctcgctcttgccgaaaccaccgtgattgaagaaaccaagaaatactttgaagaggccggt
atcgtgcttgaatccctccaaccccgtgtcccccgttctcaaacgaccatcctcgtgaaa
aacattccttacggcacttctattcaaagcttgaccgacctttttgccccgcacggtaaa
cttacgcgggtactcttgccgcctgccggtactttgggtgtggtcgagtttgagaatcat
atggacgctggcagagctttcaaagcgctcgcataccgccgtctgggaaacgcagtgctc
tatctcgaaaaaggtcctgtcggcatgttcaaatctgaaaccgctcctggcgttggaccc
ataagcacggaacaaaagagagaagaagaagccaaagcccttgctgaaaaggtggaatcc
cttccggaacagcctgaccccacggacgaagctggttcaactcttttcctcaagggtctc
aactttaccacaaccacccctcatctccagactgtactctctcatattcccggtttctct
ttcgcgcgtgtacagatgaagccagatcccaaacgacctggggaaaagctctcaatgggt
tatgggtttgtcggttttaagaccaaggaagcagcgactaaggcgctcaaggctttggaa
ggatttgaaattgatgggaagagtttagaagttaagtttgctcaacgaggtgcagaggat
gatcgggagacgaaaaagggtggtgacgctgaaggtggcaagacgaaaagtaccaaggtg
ctcgtcaagaacttaccgttcgaagctaccaagaaggacgtccgtgagcttttctcggca
tacggccaactcaagtcccttcgtctcccccgaaaagctgtccccacctcgaccggtgcc
cagtccacaagaggttttgcgtttttggagtttaccacccacacggaagccgcgcgagcg
atggaggcgctcaagcatacgcatttgttaggacgacatttggttttgcagtgggcgaat
gagggggaggaagtggatatcaaggggttgagagaaaaggtgaagggtgaggttagaggg
atggaggatggaggggataggaagaggaggaagttggatttcaaggggggtaaagaggat
gagatggatggtttggaggtgtaa
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