KEGG   Cryptococcus deneoformans JEC21: CNC06510
Entry
CNC06510          CDS       T00243                                 
Name
(RefSeq) ATP-dependent DNA helicase pcra, putative
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03420  Nucleotide excision repair
cne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNC06510
   03430 Mismatch repair
    CNC06510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNC06510
Enzymes [BR:cne01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CNC06510
DNA repair and recombination proteins [BR:cne03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CNC06510
   MMR (mismatch excision repair)
    Other MMR factors
     CNC06510
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 AAA_11 ADDB_N
Other DBs
NCBI-GeneID: 3256473
NCBI-ProteinID: XP_024512518
UniProt: Q5KJH7
LinkDB
Position
3:join(1901739..1901808,1901878..1902096,1902142..1902235,1902294..1902627,1902691..1902829,1902885..1902974,1903030..1903200,1903263..1903414,1903498..1903548,1903612..1903782,1903890..1904003,1904094..1904608,1904672..1904753,1904817..1904883,1904952..1905055,1905113..1905205,1905269..1905384,1905448..1906021)
AA seq 1051 aa
MDGLITGITSYPYLASLNQAQLKAVTASPSVPLQILAGPGSGKTRVLTCRVAYLVQHHKY
SPNEIVAVTFTNKSANEMRKRLQKLLGDKQADQLVLGTFHATCVKYLRRYGKLINLSNNF
VIADAEDCKKIMSGILKSRKAALDEASMSLKEGVVLSEISKAKAKGEPPEAMAIRAAQNK
NAFTNTLAVIADLYEEYQLALTEANSLDFDDLLLYALRLFKEAPRVVENIRHILVDEFQD
TNTTQYELLKRFAKAHKGVSVVGDPDQSIYGWRSAEIENLNKMTKDFPGVEAIYLEENYR
STGSILDAAHAIVSQDRQRIQKSLFTSHPKSAPVTLKVFSTPVIEASFISTEIKRLIAYS
GGLLRYDDFAILLRYNALSRVIESSLQKDSIPNRIVGGHKFFERMEIKDLLAYLQLADNP
GFNPAFVRVVNVPKRSIGDKTLTDILSTAKSMKISPMQLCERVTDGEGIPANIKPGVKKS
LANFVGVIRKLRRAAEGGASVADLIKMVIEKVNYEDYLRTSQPDWDSRWENVKELISYSV
TVAEEQARLSGSEYGIAPEERGFMPANSAAVEAMVNEAYERGKGKEVKQDGDTRRVKEEK
RVHPMFRRQASGSDKGSQGLDTSSAARSRSRSDSSAVDSKRIPRKKGSVKTNERHDGVIE
LLSSDEEENDIKPDVKSKKEVVDGVKQINVADAPSDSVESLANAPDNLTPLAYFLQTSML
STDTESGQDDASTPKVTIMTVHAAKGLEWPVVFIPAVEQGTFPSYRCTEPHEIAEERRLL
YVAMTRAQSFLTMSYCQFRMMGGEENNKEASEFLGDVMRHQPALLATDQPNVDTVVRKHM
SAMLCRPMPDEDLTKDMIMKHVRAAPPLSTWDPPERSSWGEKINRFARRDVTKAARATEY
WASDVDEYALPSDSLSASTSSPYTTSFTSARMNSGLSRPPAALPMAPQKKPPPPSVKSAN
RHIPPTMPFTFNTKEEIKEETSLDSLMSGGNKSLEMMAGLGLPADLPPDLVGPSAGAGGE
LAGRGSLEVARGKKRLGMGRPAPWGSKKPRK
NT seq 3156 nt   +upstreamnt  +downstreamnt
atggacggtttaattactggtattacgtcgtacccatatcttgcgtcccttaaccaagct
caattgaaagccgttactgcaagcccttcagtccctctgcaaatccttgccggaccagga
tctggaaaaaccagggtcctcacctgtcgtgtcgcctatctggtacagcatcataaatac
tcgccaaatgagatcgtcgcggttactttcaccaacaaatcggctaatgagatgcgaaag
aggctgcagaagttacttggggataagcaagctgatcaattggtactaggtacattccac
gcgacatgtgtcaagtacttgagaaggtacggcaaattgattaatctgtccaacaacttt
gtaatcgccgatgctgaagactgcaagaaaatcatgagtggtatactgaaaagccgaaaa
gctgcattagatgaagcatcaatgtctctgaaagaaggagtcgtcttatcagaaatatcc
aaagctaaagcaaaaggggagccgccggaggctatggcaatacgcgccgcgcaaaataag
aatgctttcacaaatacgcttgcggtcatcgcagacctctacgaagagtaccaactcgcc
ctgacagaggcgaattcgttggactttgacgacttgctgctgtatgccctgcgactattc
aaagaagcgcctagagtggtagagaacatacggcatatcttggtggacgagttccaagat
actaacacaacacaatacgagctcttgaaacgctttgcaaaagctcataaaggcgtgagc
gtcgttggagacccggatcagtcgatctatggctggcgttctgcagagattgagaacttg
aacaagatgacgaaggatttccctggtgtagaagcgatctatttggaagaaaactacagg
tccaccggatccattcttgatgctgcccacgccatcgtttcccaagatcgccagcgaata
caaaagagtcttttcacttcccaccccaaaagcgctcctgttacccttaaagtctttagt
actcccgtcatcgaagcgagcttcatttccaccgagatcaagcgcctcattgcatattct
ggtggtctactgagatacgatgactttgccattctcttacgttacaatgccttgtctcgg
gtgatagaatcttccctccaaaaggatagtatccccaaccgtattgttggagggcacaag
ttctttgaacgaatggaaatcaaggatttgttggcgtatcttcagctggccgataatccg
ggcttcaaccctgcgtttgtacgagttgtcaatgtccccaaacgctccatcggggacaag
accctcacagatatcctaagtacagcgaagtcaatgaagatatcccccatgcagttatgt
gagcgggtcacagatggcgaaggcatacctgcaaacatcaaaccgggcgtgaagaagagt
cttgcgaactttgtcggtgtgatcaggaaactaagacgagcagcggaaggtggtgcatct
gtggccgacctgatcaaaatggtcatcgagaaagtcaattatgaagattatctccgtact
tcgcagccggattgggactccagatgggaaaatgtcaaggaactgatttcatacagtgtc
actgtcgctgaagagcaagctcgtttatctggatccgaatatgggattgctcctgaagaa
agaggattcatgccggccaattctgcagctgttgaggctatggtgaacgaggcatatgaa
agaggaaaaggaaaagaagtcaagcaggatggagatacgaggcgggtaaaagaagaaaaa
cgggtacaccccatgtttaggcgccaggcaagcgggagtgacaagggtagtcagggactt
gatacgtcctcggcagcgaggagtcggagtaggagcgattcaagtgctgtggatagcaaa
agaataccgcggaagaagggttctgtaaagacgaatgaaaggcatgatggggtgatagaa
ttgctttcgagtgatgaggaagaaaacgatatcaagccagatgtaaagtcgaagaaagaa
gttgtcgatggagttaagcagatcaatgtggccgatgccccctctgattcggtggaatca
ctagccaacgcacctgataatttgacgcccctggcatacttccttcaaacttccatgtta
tcgacggatactgaatcaggtcaagatgatgcttctacacccaaagtcacgatcatgact
gtccatgctgcaaaaggtctcgaatggcctgtggtctttatacctgctgtcgagcaaggt
accttcccttcttatcgttgcaccgaacctcatgaaatagcagaagaacgacgattactc
tacgtcgctatgactcgagcgcaaagtttcttgacaatgtcgtattgtcagttcagaatg
atgggcggggaagagaacaacaaagaggctagtgagtttttgggggatgttatgcggcat
cagccggctttattagcaaccgaccagcctaacgtggatacggtcgtgaggaagcacatg
tctgccatgctatgtcgacctatgcctgatgaggatctgacgaaagacatgatcatgaag
catgttcgtgcagcccctcccctgagtacttgggatccacctgagcgttcttcatgggga
gagaagatcaaccgctttgctcgtcgggatgtcaccaaggctgctcgtgcgactgaatac
tgggcatcagacgttgacgagtacgccctcccgtccgattcattgtctgcctccacctct
tccccatatacaactagctttacctctgctcgaatgaactccggcctttccagaccgccg
gccgcgttgccgatggcgccccaaaagaaacctcctccgccatctgtaaaatctgccaac
agacatataccacctacaatgccgttcacatttaatacaaaggaggaaataaaggaggaa
acatcattagactcattaatgagtgggggtaataagagtttagagatgatggcggggcta
ggtttgcccgctgatctacctcctgatcttgtcgggccctccgctggcgcgggcggtgaa
ttggcaggaagaggatcgcttgaggttgccagaggaaagaagagactggggatgggaaga
ccagcgccatggggaagcaaaaagcctcgaaaataa

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