KEGG   Cryptococcus deneoformans JEC21: CND00110
Entry
CND00110          CDS       T00243                                 
Name
(RefSeq) ATP-dependent DNA helicase, putative
  KO
K10899  ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
Organism
cne  Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CND00110
Enzymes [BR:cne01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CND00110
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     CND00110
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII RQC
Other DBs
NCBI-GeneID: 3257217
NCBI-ProteinID: XP_024512700
UniProt: Q5KJ99
LinkDB
Position
4:join(37879..38085,38145..38573,38623..38712,38766..38780,38839..38908,38963..38977,39027..39059,39119..39189,39247..39322,39388..39523,39595..39631,39712..39765,39839..39915,39976..40040,40101..40108,40171..40318,40379..40440,40502..40876,40939..41652)
AA seq 893 aa
MPSSSTTPIVVSDDSDADDFFPRKDVSANRSGESKERISEEFVKGEKGGDLNLDARDAIK
TTLAKLDTEIAEVVAQLEPLQALHASLTAERRALEFQLSSISRNPCPSDSLFSTAANTID
YQSSCFPFSSAIAATLRNTFNLNKFRLCQEGVINAAVDDRDIVCVMPTGGGKSLTYQLPA
VMGRGLTVVVSPLLALIWDQVRALKEIGIECVMLTGSTSTQEQNEIYKRLRDGPSHGEKE
IRLCYVTPEKVSKSKRFMSVLEKMNQSGRLRRFVIDEAHCCSQLGHDFRPDYKKLSMLKT
LFPRVPIQAVTATLSSKTLPDLLKILRLGPITDGRSSKTTGTVFFSSPLFRPNLHYKVLP
KASNAKTAIAEMGRWIQDKHPGESGIVYCLSKKDAETVAEELKGWSNGSIKTGVYHAGID
DTEKETIHVKWREGKINCICATIAFGLGIDKGDVRYVIHHSMSKSLEGYYQETGRAGRDG
KDSDCVLFYRGQDATRLAGLIYTDVDGTGKLHEMLRFAQDLRTCRKVAFAKYFSASAHLS
TASWDNPTSLSSSDSDSTSTSPCEICDNCLRPPSSISTRDVTLESWKILRIAQEVVKQSG
RVTLPNLASLTRGLGGGSFGVVGGGEGKKGKKQKSTGERGYIDIEEFGGKVAMSADDVEV
LIIHLLLIGYLQDSYHATAFSVNVYVIPSPAAVRLTRMEREEIEAGRGVRVECTFAVPQR
KEKKAPGNGSNKVAVKRKKGEEDDEFDQAGGSSGRKLGGNMDFVGTGGRKPGNAKKARTQ
THPQDENREEEEYEYFSDVYGGLYSDGDIDQEADQQHGGDGDDWNGDGDEMEEDDEPKDD
WDEMIGDGWRDEGGWKVLNAGSGSGSGTGTGRAKGQGANGGGKQRAAIVTDSD
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgccatccagctccactacacccatcgttgtcagtgacgacagcgacgccgatgacttc
tttcctcgtaaagacgtatctgcgaaccggagcggggaaagcaaagagaggataagtgag
gagtttgtaaaaggagagaagggtggagatttgaacttagatgcaagggatgctatcaag
acgacgctcgcaaagctagatactgagattgccgaagtcgttgctcagcttgagcctctg
caagctttacatgcatctctcaccgccgaacgtcgtgcactagagttccagttatcctca
atatctagaaatccgtgcccgtcggacagcctattctccactgctgccaatacaatcgac
taccagtcatcatgttttcccttttcttctgctatagctgcaacacttagaaacactttc
aacctcaacaagttcaggctatgtcaggaaggtgtgatcaacgctgctgtagatgatcga
gatatcgtctgtgtgatgccgacgggaggaggaaagagcctgacgtatcagttaccggcg
gtgatgggtagaggtctgacagtggtggtcagcccgcttttggcgttaatatgggatcag
gtcagagcattgaaagagatcggaatagagtgcgtgatgttgactggcagtacaagtact
caagagcagaatgagatttataaacgattgagagatgggccgtctcatggcgaaaaggag
atacgactttgttatgtcactcccgagaaggtgtcaaaatcaaagaggttcatgtctgtg
ctagaaaagatgaaccaatcaggccgattgagacgatttgtcattgacgaggcacactgt
tgcagccaacttggacatgactttaggccagattacaaaaaactgtcgatgttgaaaact
ctttttccgcgagttcctatacaagctgtaacagcaaccctcagctcaaaaacgctgcct
gaccttcttaaaatactacgtctcggacctataacagacggacgcagctcgaagaccact
ggtacagtattcttttcctcccccctcttccgccccaacctccattacaaagtcctacct
aaagcgtcaaatgcgaaaacggccattgcagagatgggcagatggatacaggataaacac
cctggagagagcgggattgtgtattgtcttagtaaaaaggacgcggaaacagtcgcagaa
gagctgaaaggatggtcaaatggtagtatcaaaacaggcgtataccatgcaggaatagat
gataccgagaaagagacaatccatgttaagtggcgcgaaggaaaaatcaattgtatctgc
gctacaatcgcttttggattaggtattgataaaggcgacgttagatatgtcatccaccat
tctatgtctaaatcactcgagggatattatcaagaaacgggacgagcagggagagacgga
aaagactctgactgtgtgctattctatcgtggacaggatgcgacacgcctggctgggctg
atctatacggatgtagatggtaccggaaagctgcatgaaatgctgaggtttgcgcaggac
ctgagaacttgtcgaaaagtggcttttgccaagtacttttccgcctctgcgcatctctcc
actgcctcatgggacaatcctacctccctctcttcctcagactcagactctacttccacc
tcaccttgcgagatatgcgacaactgtctccgacccccttcttccatctctacccgcgac
gtcaccctcgaatcatggaagatccttcgtatagcacaagaagtcgtcaagcaaagtgga
agggtaacgttgccaaaccttgcgagcctcacgagaggcctgggtggaggtagtttcggg
gtagtcggtggcggagaaggaaagaaggggaaaaagcaaaaaagtacaggggaaaggggg
tatattgatatcgaagagtttggaggaaaagtggcgatgagtgctgatgatgtcgaagtc
ctgattattcatctccttctcatcggctacctccaagactcttaccacgccaccgcgttc
tcagtcaacgtctacgtcattccgtcccctgccgctgtccgtctcactcgtatggagaga
gaagaaatcgaagcaggacgaggagtgagggtggagtgcacgttcgcggtccctcagagg
aaggaaaagaaagctcccgggaatggttcaaacaaggtcgctgtgaaaaggaagaaggga
gaggaggacgatgagtttgaccaagcaggtggtagtagcggtagaaagcttggggggaat
atggactttgtaggcactggcggaaggaaacccggcaacgccaaaaaggccagaacccaa
actcacccacaagatgaaaacagagaagaagaagaatatgaatacttttccgacgtctac
ggtggtttgtactccgacggtgacatcgatcaagaggcggatcagcagcatggcggtgac
ggtgatgattggaatggtgatggcgatgagatggaggaagatgacgagccgaaggatgat
tgggatgagatgattggtgacggatggagggatgaagggggttggaaggtacttaatgcc
ggttctggctccggttctggtactggtactggaagagcgaagggacaaggagccaacgga
ggcgggaagcaaagggcagccattgtaaccgacagcgactaa

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