Cryptococcus deneoformans JEC21: CND00570
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Entry
CND00570 CDS
T00243
Name
(RefSeq) transcription factor, putative
KO
K24752
WD repeat-containing protein 70
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cne04121
]
CND00570
03036 Chromosome and associated proteins [BR:
cne03036
]
CND00570
03400 DNA repair and recombination proteins [BR:
cne03400
]
CND00570
Ubiquitin system [BR:
cne04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CND00570
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
CND00570
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
CND00570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
PD40
Beta-prop_WDR19_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT140_1st
SUKH_6
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
3256881
NCBI-ProteinID:
XP_570313
UniProt:
Q5KJ58
LinkDB
All DBs
Position
4:complement(join(162974..163039,163103..163683,163734..163898,163957..164168,164218..164268,164315..164409,164461..164604,164660..164998))
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AA seq
550 aa
AA seq
DB search
MEGFDLPMSFGKKSKAGNSNLKAKVENTKRADIPTPVKEEKPEEEVPGPSISTSGRKTEA
EEEDDEEIGPIPPSATGKRKAEENDASDDEQEAEEEVDRLPISHEIILKDHTKVVSALAV
DPSGARIATGSHDYDTKLWDFGGMDHRLKPFKSFEANGNYYVHDLSYSPDGQQLLVISGT
VHPKVFNRNGEDEMEFNKGDVYLRDMKNTNGHTAEINAGAWHPTDKSIFLTCSNDSTLRI
WDTSNKRKQKQVIVVKSKERGARTKVTACAWSPDGKWIAGVCLDGTLHIWDTSSNFARPK
YSCENAHPKNTETTGVAFSRDGLRVATRGGDDTVKLWDIRSIRNPLAVAKNLDNLYPETN
IIFSPDDTQILTGTAAPKGQKGGLVFLNSKDLKEERRIAIGDGSVVRVLWHSRINQIFAT
LSTGGVHVLYSPNSSIHGALLPLAKLPKTAPRDPSFSTVDLKPVIYTPDALPMYQEQGHR
ESLHQKEKKAKKMKPMEPVSGVGRAGRLGASETQSFVHSMYPETLKFEDPREALLKYASK
EEQEKKKQEM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagggcttcgacctccctatgagttttggcaaaaaatccaaggcaggaaactcgaac
ctcaaggcgaaggtggagaacacgaagcgagcagacatccctacaccagttaaagaagaa
aagcctgaagaagaagtaccaggaccttcaatatctacatcagggaggaagacagaggcc
gaggaggaagacgacgaggagattgggcccataccgccttctgcgactggaaagcgtaag
gctgaggagaatgatgcgagtgatgatgagcaagaggcagaagaagaggttgataggcta
cctatatcgcatgagattatcctgaaagatcacacaaaggtcgtctctgcccttgcggtc
gatccttctggtgctcgtatcgctactggttcgcacgactatgatacgaaactctgggat
tttggtggtatggaccatcgcttaaaaccattcaagagctttgaagcgaatgggaattac
tacgttcatgacttatcatactctcctgacggccaacaactccttgtaatatcgggaact
gtgcatccaaaagtgtttaaccgtaatggtgaggacgagatggaattcaacaagggtgac
gtctatctgcgcgatatgaagaataccaatggccatactgccgaaatcaatgctggtgct
tggcaccctacagataaatccatcttcctcacctgctccaacgactctacactcagaata
tgggacacatcaaataaacgaaagcagaaacaggtcatcgttgttaaatccaaagaacgt
ggtgcccgaactaaagtgacggcctgcgcttggagtccagatggtaaatggatcgctgga
gtttgtttggatggaacattgcacatctgggatacttcgtcaaactttgcgcgaccaaaa
tattcttgcgagaatgcccatccaaagaacactgagacgactggtgtcgcattctccagg
gatgggctcagagttgctactcgagggggggacgatacagttaagctttgggacatccgc
tcaattcgaaaccctctggctgtcgctaaaaacctcgacaatctttaccccgaaactaat
atcatcttctcccctgacgacacccaaatcctgaccggtaccgctgctcccaagggccaa
aaaggcggcttggtattcttgaacagcaaggacctgaaagaagagcggcggatcgctatc
ggggatggaagtgtagtgagagttttgtggcattcacgtatcaaccaaatcttcgccacc
ctctccacaggcggtgttcacgttctctattctcccaattcatctattcacggtgccctt
ctccctctcgccaagctccccaaaaccgccccacgcgatccatccttctccactgtcgat
cttaaacccgtcatctacactcctgatgctttaccgatgtatcaggaacaaggccatagg
gagagtttgcatcagaaggagaagaaggcgaagaagatgaagccgatggaacctgttagt
ggtgtgggtagggcaggaaggctaggagcgagtgagacgcagagctttgtgcatagcatg
taccccgaaacgctcaaatttgaggatccgagagaagcgttgctcaagtacgcgagcaaa
gaagaacaggagaagaagaaacaggagatgtag
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integrated database retrieval system
