Cryptococcus neoformans var. neoformans JEC21: CND01220
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Entry
CND01220 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K12877
protein mago nashi
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
cne03015
mRNA surveillance pathway
cne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CND01220
09122 Translation
03013 Nucleocytoplasmic transport
CND01220
03015 mRNA surveillance pathway
CND01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CND01220
03041 Spliceosome [BR:
cne03041
]
CND01220
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CND01220
Spliceosome [BR:
cne03041
]
Complex C
Other components
EJC/TREX
CND01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
3257271
NCBI-ProteinID:
XP_024512702
UniProt:
Q5KIZ3
LinkDB
All DBs
Position
4:complement(join(347717..347727,347780..347825,347879..347968,348031..348118,348179..348242,348433..348492,348564..348619,348700..348705,348765..348805))
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AA seq
153 aa
AA seq
DB search
MSTEDLLKDKFYLRYYTGHQGAHGHEFLEFEYSYGRIRYANNSNYRNDSLIRKEMFVSPA
VVDELKRIVRESEITKEDDVAWPRKNVVGKQELEVRIDKEHISFETAKIGALAEVNDSSD
PDGLRVFYYLIQDLKCFIFALIQMHFKIKPIQS
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagaagaccttttgaaagacaagttctaccttcgttactacactggtcatcaa
ggtgcacatggacatgagttccttgagttcgaatactcctacggacgtattcgatatgcc
aacaactccaactaccgaaatgacagtcttattcgaaaagagatgttcgtctcccccgcc
gttgtcgacgaattgaagagaattgttcgagagagtgaaatcacaaaagaagatgatgtg
gcatggcctaggaagaacgtcgttggaaagcaagaactcgaagtcagaatagataaggaa
catatctcattcgagactgccaagatcggtgctcttgcggaagtgaatgattctagtgac
cctgatggattacgagtattttactacttgatccaggatcttaaatgtttcatttttgcc
ctcattcagatgcacttcaagatcaagcctatccaatcctaa
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