Cryptococcus deneoformans JEC21: CND01650
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Entry
CND01650 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CND01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CND01650
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CND01650
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CND01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
3257367
NCBI-ProteinID:
XP_024512720
UniProt:
Q5KIV2
LinkDB
All DBs
Position
4:complement(join(447150..447244,447306..447387,447451..447633,447687..447755,447815..447961))
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AA seq
191 aa
AA seq
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MSSPSLLLPGQPLPAQLITPPLPKCGKGCYERNGQILASVVGRPRRDGAVVSVIGREETV
GTVDVDSIVIGVISRLTPQQAHMTLTTLSDRPLPESSEDFTGLIRIADIRLTERDKVKMG
ECFRLGDIVKAKVLSLGDARSYYLSTAADELGVVYAKSEAGNPLLPVSYQEMEDEVTGKK
EKRKVAKPEGI
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccatcgttgcttctgcccggtcaacccttaccggcccaacttatcaccccg
cccctaccgaaatgcggaaaaggttgttatgagcgcaacggtcaaatcttggctagtgtt
gtgggaagaccacggagagacggtgctgttgtcagcgttatagggagggaggaaaccgtc
ggtacagtcgatgtagactccatcgtgatcggcgttatttctagattgacacctcaacag
gcacatatgactcttacaactttgagcgatcgtccccttcccgaatcttcagaagatttc
acgggcctgattcgaattgcggacattaggttaacagaaagagacaaggtgaaaatgggt
gaatgtttcagattaggcgatattgttaaggcgaaggtgctaagtttaggtgatgcaagg
agctactatttgtcaaccgcagcggacgagctgggcgtcgtatatgcgaaatcagaagct
ggtaatcccttattgccggttagctatcaggaaatggaggacgaagtgactgggaaaaag
gagaagagaaaagttgcgaagcctgaaggaatataa
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