Cryptococcus deneoformans JEC21: CND02660
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Entry
CND02660 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K03681
exosome complex component RRP40
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CND02660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CND02660
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CND02660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_S1
KH_6
Rrp40_N
RRP4_S1
Glycos_transf_N
Motif
Other DBs
NCBI-GeneID:
3256872
NCBI-ProteinID:
XP_570241
UniProt:
Q5KIK2
LinkDB
All DBs
Position
4:join(725918..726148,726203..726352,726414..726565,726619..726829)
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AA seq
247 aa
AA seq
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MPTLILPGETVPIPSTSKAVVLGPGISQSTPTLQASSSTASGSSSAQGYIATRLGMLHSG
KGKERSQKLWIEGNSKRYIPAQKDIVLGIIIARHADGYRVDLGSSQMAQLDALAFEGATK
RSKPNLKVGTLVFARVMSASRDMEPELECFDPNTGKSDGFGELKGGVMVNATLQLCRRLL
DRNHIVLPTIASIFPFEIAIGLNGRVWMKAETVGETLAMKRLIESVDDHIIPVEEKAIKE
KLREYLS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccaactcttattctaccgggggaaacagtccctatcccatcgacatcgaaagccgtc
gtactaggccccggcatctcccaatcgactccaaccttacaagcttcctctagtaccgcg
tccggatcctcatcagctcagggatatatcgcaacgagactggggatgctgcattcggga
aaaggaaaggaacggagtcagaaattgtggatagaaggaaactcgaagaggtatatacct
gcgcaaaaagatatagtcttggggataatcattgctagacatgccgacggatatcgtgta
gatctgggctcttcgcagatggcccaactcgacgctttggcgtttgagggtgccacaaag
aggagtaaaccaaacctcaaggttggtacattagtgtttgcgcgtgtgatgtccgctagt
cgagatatggaacctgaacttgaatgttttgatcccaatactggcaagtcggatggtttt
ggtgagttgaaagggggagtgatggtcaatgcaaccctccagctgtgtagacgtcttctt
gatagaaaccacattgtcttgcccactatcgcttctatttttccttttgagattgctatt
ggtcttaacggtcgagtgtggatgaaggcagagacggtgggcgagacgttggcaatgaag
cgtttgatcgaaagcgtggatgatcacatcatccccgtggaagaaaaggcaatcaaggag
aaattgcgagagtacctgtcctga
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