Cryptococcus deneoformans JEC21: CND02880
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Entry
CND02880 CDS
T00243
Name
(RefSeq) splicing factor SF1, putative
KO
K13095
splicing factor 1
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CND02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CND02880
Spliceosome [BR:
cne03041
]
Complex A
Other components
Complex A specific factors
CND02880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
zf-CCHC_3
KH_1
zf-CCHC_2
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
3257032
NCBI-ProteinID:
XP_570209
UniProt:
P0CO44
LinkDB
All DBs
Position
4:join(778648..778686,778732..779068,779124..779755,779808..780000,780053..780274,780324..780495,780545..780590)
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AA seq
546 aa
AA seq
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MWRPAAKTTGTNDVPLANKRRFGLPEEGPPSNSPSYAPRPAADIQYFNGRQERERDARDD
RERPRDDYDRRRDDYVRDDRDRRYDDYPRDGHSDRRDERSKWDEGDRREAPRGRERSRDR
GDSNEDGPRKRRSRWGDASAKVNVPGMPVAVMGNVSQTELDNYAIHVRLEEINRKLRTGD
VVPPEGQRSPSPTPQYDAYGRRTNTRELRYRKKLEDERTRLIDRAVKSDPNFRPPVDFQH
KRGSRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEGKGRA
GNFPQDEEDELHCLITADDESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLNG
TLRDDENQLCQNCGEKGHRRWECPQQRVYSANVICRICGGAGHMARDCRGRGDPSLTQNK
QTAFDSEYTALMAELGEGGGSTPGSAPAAAIGAPGAIPPQSRVPPWRLPENWQTNSGGFR
GPPNFQAQGYQQAAPGAAAYGQQAYPGYAGYQTGAVSGYGSPATGGADAYAAYYASMGQQ
APAAAV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaccagctgcaaagacaaccggcacgaacgacgtccctctcgcaaacaagcga
cgcttcggtctccccgaagaaggtcctccctctaattcaccttcctacgcacctcgtcct
gctgccgatattcagtatttcaacggccgacaagagcgcgaacgtgatgctcgggatgac
agagagaggccaagggatgattacgacagaaggagggatgattatgtgcgagacgatagg
gacagaagatatgacgactaccctagggatggacacagtgacagacgagacgagaggtcg
aagtgggatgaaggggataggagagaggctcccagaggccgtgagcgttctagggatcga
ggagactcaaatgaagatggcccgcggaagcgtcgatctcgatggggcgacgcttcagcc
aaagtcaatgttcctggaatgcctgtcgctgtcatgggtaatgtttctcagacagaactt
gacaattatgctattcacgtccgtctcgaggagatcaatcgcaaactgaggaccggtgat
gtcgtaccccccgagggtcagcgttctccatctccaactcctcaatacgatgcctacgga
cgcaggaccaatacaagggaattgagatatcgcaagaaactggaagatgagcgtacgaga
ttaattgatcgagcggtcaagtcagaccccaatttccgaccccctgtggacttccagcat
aaacgaggttctcgacctcaagacaaagtctacattcctgtcaaagaattccctgagatc
aactttttcggtttgctcgttggtcctcgtggtaattctctcaaaaagatggaaagggaa
agcggtgccaaaatcagcatccggggtaagggaagcgtcaaggagggtaagggaagggcc
ggtaacttcccccaggatgaggaggatgaattgcactgtttgatcaccgccgacgatgag
agcaaggtcaagacttgtgtcgccctgatcaacaaggttatagaaactgctgcgtccacc
cctgaaggcgaaaatgatcataagcgaaaccagcttcgagaattggcttcgcttaacggt
actcttcgagacgacgaaaaccagctttgccaaaactgtggcgaaaaaggccacaggcgt
tgggaatgcccacaacagagagtgtatagcgccaatgtcatctgtcgtatttgtggcgga
gccggccatatggcacgagattgccgcggtcgtggtgatccaagccttactcagaataaa
caaactgctttcgattcagagtacactgcacttatggcagagctcggcgaaggtggtgga
tccacgccaggctccgctcctgctgctgccattggcgctcctggtgctattccaccccag
agtagggtccccccttggaggcttcccgaaaattggcagaccaactctggtggtttccgt
ggtccccccaatttccaagctcagggctaccagcaagccgccccaggtgctgctgcctac
ggtcaacaagcttacccgggttacgccggttaccagactggcgccgtgagtggatatgga
agtcccgccaccggtggtgctgacgcctatgccgcgtactatgcctctatggggcaacaa
gctcctgccgctgctgtctga
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