KEGG   Cryptococcus deneoformans JEC21: CND03220
Entry
CND03220          CDS       T00243                                 
Name
(RefSeq) mRNA processing-related protein, putative
  KO
K11098  small nuclear ribonucleoprotein F
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CND03220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CND03220
   03041 Spliceosome [BR:cne03041]
    CND03220
   03032 DNA replication proteins [BR:cne03032]
    CND03220
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CND03220
Spliceosome [BR:cne03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CND03220
  U2 snRNP components
    CND03220
 Complex B
  U1 snRNP components
    CND03220
  U4/U6.U5 tri-snRNP components
    CND03220
 Complex C
  U2 snRNP components
    CND03220
DNA replication proteins [BR:cne03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CND03220
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 3257126
NCBI-ProteinID: XP_570179
UniProt: Q5KIE8
LinkDB
Position
4:complement(join(874131..874170,874308..874396,874500..874619,874685..874699))
AA seq 87 aa
MSAIAPVNPKPFLQDLTGKVVYVRLKWGLEYRGYLVSTDGYMNLQLANTEEIENGKSNGA
LGEVLIRCNNVLYIREFKDRAGGMDQD
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtccgccatcgcacccgtcaacccaaagcccttcctccaagatctcacaggcaaggtc
gtctatgtccgattaaagtggggtctcgagtacaggggctatctcgtatctacagatggc
tacatgaacttgcaacttgctaacactgaagaaattgagaatggcaagtcaaatggtgct
ttgggagaagtcctcattcgctgcaacaatgttctgtacataagagagttcaaagacagg
gcaggcggaatggaccaagattag

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