Cryptococcus deneoformans JEC21: CND03230
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Entry
CND03230 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CND03230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CND03230
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CND03230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
AAA_13
Mis12
Synaptonemal_3
FPP
DUF724
TACC_C
Motif
Other DBs
NCBI-GeneID:
3256878
NCBI-ProteinID:
XP_570178
UniProt:
Q5KIE7
LinkDB
All DBs
Position
4:join(874905..874908,874954..874989,875093..876759,876816..877015,877074..877419)
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AA seq
750 aa
AA seq
DB search
MAAPNPFAGFGSKPQPSASGTSLFGNTSSQPASGSGLFGSSSTTNNSSATPAASGGGLFG
GGAQTSGGLFGNNTTGANNNNNNSNAAAANSSTPAAPSGGSLFGGFGTGGFGTNNTATGS
TTPASKPAFGGFGQSTTPAAPPPASTGTSLFGGAATGTSTGGGLFGAKPAEGTGAPGAAS
TTGGFTGFGAKPAGTTSAPATGGLFGSKPAESTPAASSSPAPSSGGGLFSFGAKPASTTT
PAAPSLFGSAPAKDASSSTPTSGTPPTTSGGGPFGGGGLFGAKPAAPATEAPKADTATTA
PAAPTSGLFGGVGASKPAEAPKPAAGGFSFGNLGAKPATPSTTEAPKTGGFSFGASAPSA
DKKDEMPAEAPKTGGFSFGAPAAAASNEEKKTDKPAEAPKPGGFSFGNIGTSATTASGDD
KGKAPEAPKAGGFSFGGLGAKTDGDKDKAPAAPTPAAPAAGGLFGAKPADAGQSSTAAPS
ASGGLFGANPNTTAAASTTTPAVPTAPIASAPANVEKPSEPVPNLLRGKALDDIVEGWNK
DLEEQVKEFERQAGEVREWDKILVRNGNQITALRRQVLEAQQTQAAVDEPLNYFEAQQNQ
LESMLDVYEKEIAKMSNDSTRPLAAKMPADREREKAYTLAEDLNKQLDDLSRNLSQMIEQ
VNKISTSQSSLDASTSSLTNRPGTPSASAADAASQMPDDPVSQLSAILGAHLRALSSIDS
SAGKLSTKVGELETKMGSSGSARGWGLPRR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccaaaccccttcgccggcttcggctcaaagccccaaccctccgcttccggc
acctcactgtttggaaacacttcgtctcaacctgcttctggtagcggcttattcggctcg
tcatccactacaaacaactcctctgctacccctgccgcctcggggggcggcttatttggc
ggtggggcacagacttctggcggtttgttcggaaataacaccaccggtgccaataataac
aataacaactcaaacgcggcagctgcaaacagctcgactcctgcagcgccctctggaggt
agtctatttggaggatttggaactggaggatttggaacgaacaatacggcgactgggtcc
acgactccagcttctaaacctgcttttggtggctttggtcaatccactacaccggccgca
cctcctccagctagtacagggacaagcttatttggaggcgctgctaccggcacaagcaca
ggtggtggcttgtttggtgctaaacctgcagaaggcactggagcacctggcgcagcgtca
acaacgggtggatttacagggtttggagcaaagcctgccggcaccacatctgcgcctgca
acaggtggactttttggttcaaagcctgcagaatctacccctgctgcttcttcttctcct
gcgccctcatccggtggtggcctcttttcattcggtgctaaacccgcctccactactaca
cctgctgctccttcacttttcggctctgctcctgccaaggatgcttcttcatcaactcct
acatctggcacaccacccaccacttctggaggcggaccctttgggggtggggggcttttt
ggtgccaagcccgctgctcctgctacagaggctcctaaagctgacaccgccaccactgcc
ccggctgccccaaccagtggtttgtttgggggagtaggtgcctcaaaacccgctgaagca
cctaagcctgctgctggagggttctccttcggtaacttgggagccaaacctgctactcct
tctaccactgaagctcccaaaacgggaggcttcagctttggagcttctgccccaagcgct
gataagaaggacgagatgccggctgaagcgcccaagacgggaggcttcagttttggcgcc
cccgctgctgccgcttccaacgaagaaaaaaagactgataagcctgcagaggctcccaaa
ccgggtggattcagctttggtaacattggtacatccgcaacaacggcctctggagacgat
aaaggcaaggcgcctgaagctcctaaggctggcgggttcagttttggcggtcttggtgca
aagacagatggtgacaaggataaggctccagctgcgcctacgcctgctgcgcctgctgct
ggtggcttgtttggagccaagcctgccgatgctggtcaaagcagtaccgccgccccttca
gctagcggtggtctctttggtgccaatcccaacactaccgcggcggcttctaccactaca
cctgctgtaccaaccgcccccattgcttccgccccagccaatgtggagaagcccagcgaa
cccgttcccaaccttcttcgtggcaaagccttggatgatatagtggaaggatggaataag
gatttagaggagcaagtgaaggagtttgagaggcaggctggtgaggtgagggagtgggat
aagattttggtcaggaatggtaaccaaattacagctcttagaagacaagtgttggaggct
cagcagacccaagctgctgttgatgaaccgttgaactactttgaggctcagcaaaatcag
ctggaaagtatgttggatgtgtatgagaaggagattgcaaaaatgtcaaacgacagcacc
aggccgttggcggcgaaaatgccggctgatcgagagcgggagaaggcttacacacttgcc
gaggatcttaataaacagctcgatgacctgtctcgtaacctgtcacagatgattgaacaa
gtaaacaaaatttcgacctcccaatcatccctcgacgcaagcacgtcctctctcacgaac
cgtcctgggacaccctccgcgtctgctgctgacgcagcttcacaaatgccagatgaccca
gttagccagctttctgctattcttggtgcgcacttgagggcattgagctcaatcgactcc
agtgcgggcaaactatctaccaaggttggagagttggaaaccaagatgggcagtagcggg
tctgcccggggatggggattgccaaggagatga
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