KEGG   Cryptococcus deneoformans JEC21: CNE01090
Entry
CNE01090          CDS       T00243                                 
Name
(RefSeq) rRNA primary transcript binding protein, putative
  KO
K14561  U3 small nucleolar ribonucleoprotein protein IMP4
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CNE01090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cne03009]
    CNE01090
Ribosome biogenesis [BR:cne03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CNE01090
SSDB
Motif
Pfam: Brix
Other DBs
NCBI-GeneID: 3257909
NCBI-ProteinID: XP_571230
UniProt: Q5KH66
LinkDB
Position
5:join(307005..307007,307059..307251,307373..307482,307538..307997,308054..308154)
AA seq 288 aa
MLRRQTRERREYIFKKSQESQERAIYERKQKIKDLLAQGKPLPTELRNEVRELGGKDLVL
DEAQQDPRSHIDDEYAKVGTYDPKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTV
VKDLVSACNAQGVTDLVVVHEHRGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTV
SEQYPHLIFDGFSTKLGERVTGILKALFPVPKDDAKRVMTFKNENDFISFRHHVFANTGH
KDVQLAEVGPRFEAKPFEIRQGTVDQTEADVEWLLRPYLRTAKKRNQF
NT seq 867 nt   +upstreamnt  +downstreamnt
atgctccgacgacaaaccagagagaggagagaatatatcttcaagaaatcccaagagtct
caggagagagcgatctacgaacggaaacagaagatcaaagacttgttggctcaggggaaa
cctctccctacagaattgcggaatgaggtgagagagcttggagggaaggatttagtgctt
gatgaagctcagcaagatcctcgatctcacatcgacgacgaatatgctaaagtcggcacg
tacgaccctaaaattgtcattacaacctctcgttccccctcttctcgtcttcttcagttc
tccaaagaactccgactggttttccccaactcctaccgtctcaacagaggtaacaccgtc
gtcaaagacctcgtctccgcatgtaatgctcaaggtgtaacagacctcgtcgtcgtccat
gaacatcgtggtgtccccgacgctctcattgtctcccatctcccccatggtcctactctc
tccatgacgcttcacaacgttacccttcgacatgatgtcagctccaactcaagtacagtg
tcagagcagtaccctcatctgatctttgatggcttctctacaaagttaggtgaaagagtg
accgggatcttgaaggcgctgtttccggtgcccaaggacgatgcgaagagggtgatgact
ttcaagaacgaaaacgattttatttctttcaggcaccatgtatttgccaatactggtcac
aaggatgttcagcttgcagaggttggtcctcggtttgaagctaagccgtttgaaattcgt
cagggcactgtcgatcaaaccgaggcagatgttgagtggctccttcgaccttacttgcgt
acagcgaagaaacgcaaccaattctaa

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