Cryptococcus neoformans var. neoformans JEC21: CNE01810
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Entry
CNE01810 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNE01810
03036 Chromosome and associated proteins [BR:
cne03036
]
CNE01810
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CNE01810
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
CNE01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
3257602
NCBI-ProteinID:
XP_024512848
UniProt:
Q5KGZ5
LinkDB
All DBs
Position
5:complement(join(493968..494447,494508..494948,495003..495009,495085..495098,495152..495271,495324..495473,495533..495803,495887..496233))
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AA seq
609 aa
AA seq
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MPGDSSWALPIFARPFRPHPLDTWATEEEATQTSSPIAPSHLERKVDEEPEDDDDDCESE
NREELQEAKADDGPESVEWKSKWIPKVSKKSTVDQLREALEQMGLNTKGKKETLIRRAQN
AIHAANLSVALESQASTPSGDGDNPWDCGDFPPDSVLAAHFVAKEKRRQEREEMKILGQR
YRSFLCFDVEATCRGGKEFDYPNEIIEFPVVLVRWGEPNEEGKRVLEKIDSFRSYVRPTW
RPILTDFCKSLTGIQQETVDKSPIFPEVLKQLEGWLDKWDLRGDKGLKDALWVTDGPWDL
RDFVPKQLHITPPNPFPNYFHGPYLNIKHAVQSVMSEINRRRVYAAAHPDNAANERATQP
ITTSRRAGKWRPGQGAEPLGGVSRRGPREATPPPAQGVTSPATVMVDRAPLPTPPRTSVR
KEGDYYLNIAGMCEALGLGEFEGRQHSGLDDATNISRILIALSRWNVIFEPNGVIQPMGS
GKRYPWMGESGKVVWEEWMSSQRPQDDPAKREAEEKKKQKDSKAQDALTEEFEPSVPAEE
DPAIRHPEDGTAEPWEEGCGEYYEGFQEEESTTIDEGPQNSLDFVPRILQRKHRVLMRNN
AQNQQVSIP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcccggagacagctcgtgggccttgcccatttttgcaaggcccttcagacctcatcca
ttggacacttgggcaacagaagaagaagccactcaaacatcctcaccaatcgccccatcc
cacttagagcgcaaagtggatgaagagcctgaagatgatgatgatgactgcgagtccgag
aatcgtgaagagcttcaagaggccaaagcggacgacggtccggaaagtgttgaatggaag
agcaagtggattcccaaggtcagcaagaagagcacagtagatcaattgagggaagcattg
gaacaaatgggactgaatacaaaggggaaaaaagagacgctgattaggcgagctcaaaat
gccatacacgctgccaatttgagtgttgctcttgaaagccaagcgtccactccatccgga
gacggagataacccttgggactgcggggatttccccccagacagcgtactcgcagcccat
ttcgtggccaaggagaagagacggcaggaaagggaggaaatgaagatacttggccagaga
tataggagttttttgtgctttgatgtcgaggcaacttgtaggggagggaaggagtttgac
tatcccaacgaaatcattgaatttcctgtagttctggtccggtggggagagcccaacgag
gagggtaaaagggtattagagaagattgattcattcagatcatatgttcgacctacatgg
cgacctatccttaccgatttctgcaagagccttactggcatccaacaagaaaccgtagac
aaatcccccatttttcctgaagtcctaaagcaactggagggatggcttgataaatgggat
ctgagaggagacaaggggctcaaagacgctctatgggttactgatggcccttgggatcta
cgagattttgttcctaaacaacttcacataactccgcccaacccattccccaattacttc
catggtccctaccttaatatcaagcacgccgtccagtctgtaatgtccgagatcaataga
cggagagtctacgccgctgcccaccctgataatgctgccaatgaacgagccacccagccc
attacgacaagtagacgagcaggaaaatggaggcccggccaaggagcagagccgttagga
ggggtaagtcgtcggggtccgagggaagcgacaccgcctccggcgcaaggagttacatcg
ccagcgacagtgatggttgacagggcgcctcttccaaccccgccgaggacctcagtcagg
aaggaaggcgattattaccttaacattgctgggatgtgtgaagcactaggtttgggagaa
tttgaaggacggcaacactctggattagatgatgctacaaacatttcccgtatcctcata
gcgctatcaagatggaacgtaatctttgaacccaacggagtcattcagccaatgggttcg
ggaaagagatacccctggatgggagagagtggaaaggttgtatgggaggaatggatgtcg
tcgcaacggccacaggatgatcctgccaagagagaggcggaagaaaagaaaaagcaaaag
gactccaaggcgcaggatgcccttacagaagaattcgagccatcagtcccagcagaagaa
gacccggccattagacaccctgaggatggaactgcagaaccctgggaagagggatgcggt
gagtactatgagggattccaggaagaggaatcaacgacaattgacgaagggcctcaaaac
tcgttggacttcgtacccaggatattgcaaagaaaacaccgtgtcttgatgagaaataat
gcccaaaaccagcaagtctctataccatag
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