Cryptococcus deneoformans JEC21: CNE02470
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Entry
CNE02470 CDS
T00243
Name
(RefSeq) vacuolar membrane protein, putative
KO
K12385
Niemann-Pick C1 protein
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
CNE02470
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CNE02470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cne02000
]
CNE02470
Transporters [BR:
cne02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
CNE02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
ACR_tran
Motif
Other DBs
NCBI-GeneID:
3257964
NCBI-ProteinID:
XP_570950
UniProt:
Q5KGS9
LinkDB
All DBs
Position
5:complement(join(665944..665995,666050..666276,666329..667362,667414..667633,667686..670028,670086..670202))
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AA seq
1330 aa
AA seq
DB search
MPSSQSRSGKGICAMRGTCGKTSMFGADLPCPDDSDATVPDQRLLDLMASVCGPSYSLPD
HVCCTYDQLSTLSDRLQQAAPLIASCPACINNFRSFYCDFTCSPNQSTFLSVTATQKTTE
GKDAVKEVDYEVSSDFKQGFYDSCKDVQFGATNGFAMDLIGGGATNASGFLKYMGDLRPG
LGSPFQINFPDNDDSAYRRAPLSCSDAENINARCACADCPSVCPSLPYIAPPSTKQCHVG
AVSCLTFSLLIIYSVIILVGALLYIWKQAARHRQRRYERVALLDPPHSPTIQNGQGSGLD
GLMGRNDDAESGPSGSIHFRLGRGASLLDPMEHLQPKQNKINATLRRFFYRLGLTCAKRP
IEVFAISALIVGLFNFGWKYFEVETDPVRLWVSPTSESASQKQFFDDSFGPFYKSEQIFI
TQSSGSPVNYDTLDWWLKVETEINALKTSDGIGLEDICFAPAGKGTPCVIQSVSAWLGDD
MEVWGEEWESRVRDCASRPGECLPPFGQPIDPKLVLGGANGDWLEAKALVVTWVVNNYND
ERVEPAEQWERKLRDYLRDLKRPGIKISYSTGVSLEEEINKSTNTDVKIVVLSYLVMFFY
VSLTLGGGLPPSMIQAFTHRAYRLVFRIGVLLHLVKDAPLEESAPPPDFRVIPTLLSVNS
KFSLGLFGIVIVLIAVSSSVGLFSLLGVRVTLIIAEVIPFLVLAVGVDNVFILVHELERQ
NNLHAAQQPGDDESVHSNGAQPSGTFLAPEERVARAVARMGPSIMLSSVTEVVAFALGAL
VPMPAVRNFAIYAAGSVLFGAIMQCTVFVSAMTLDLRRSESMRIDCFPCIRLRPPIGLYD
NEAPSREGMVKKFMRTVYAPSLLRHEVKQLVLVAFGGLFLAAIIGIQHISLGLDQRLALP
SESHLVPYFNDVDSYLDVGPPVYFVTEGGDPSSRHGQQQLCGRFTTCLELSVANTLEAER
KRPDSSFIASPPAAWIDDFLQWTNPTFESCCRVRRRDPTIFCSPKDSERLCRPCFEGQKW
DSTMDGLPEGEDFMRYLEQWLISPTNDECPLGGQAPYSAAVKLVSSNTTVAASHFRTYHT
PLKSQADFINALAAARRISDDITHRTGVRVFPYSLFYVFFDQYEHIISMAIQVLFLAFVA
VLVITSTLLGSWRTGGTVTFTCALAVINVMGVMGYWGISLNAISLVNLVISLGIAVEFCS
HIARAFMGAGSGLPLDKVEGRKERDERAWTALVDVGPSVFSGITMTKLIGISVLALTRSK
LLEVYYFRMWLSLILSGALHGLVLLPVLLSYLGGQGYPLEDTDEDWVTSQMRRPMDYEYA
PFADTDSVDD
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgtcccaatcgaggtcgggcaagggcatatgtgccatgcggggcacttgcggc
aaaactagcatgttcggcgcggatttaccatgtcccgacgacagcgatgcgaccgtcccc
gaccaaagacttctggatcttatggcttcggtctgtggtccttcctattccttgccagac
cacgtttgctgcacctacgaccagctctcgacactttccgatcgtttgcaacaagctgct
cctcttatcgcgtcatgccctgcttgtatcaacaactttaggtctttctattgcgatttc
acctgctctccaaatcaatccacattcctatcggttactgccacgcaaaaaactactgaa
gggaaagatgcggtgaaagaagttgattacgaggtcagttctgacttcaaacaaggcttc
tatgacagctgtaaggacgttcagtttggtgccacgaatggatttgctatggacttgata
ggagggggtgccactaacgccagtggttttttgaagtatatgggagacttgaggccaggg
ttgggctcaccgtttcagataaatttcccggacaatgatgactctgcgtaccgacgagca
cctctcagctgttcagatgcagagaacatcaatgcccgatgcgcctgtgccgactgtccc
tccgtgtgcccttcgcttccctatattgcaccaccctcaaccaagcaatgtcacgtgggc
gccgtctcatgtctcaccttctccctgcttatcatctactcggtcatcatcctcgtcgga
gcattgctctatatctggaagcaggcagcccggcaccgacaaagacgttatgaacgcgtc
gcactgctcgatcctccgcattcaccaactatccaaaacgggcaggggagtgggcttgat
ggtttgatgggaagaaatgatgatgccgaatcggggcctagtggctccattcatttccga
cttggtagaggagctagcctccttgatccaatggaacacctgcaaccgaaacaaaacaag
atcaatgctactcttcgccggttcttctaccgcctaggattgacatgtgcaaagcgaccc
attgaagtctttgccatctcagctcttattgtagggttattcaactttgggtggaaatat
ttcgaggttgaaactgaccctgtacggttatgggtatcaccgacaagtgaaagtgcctcc
cagaaacagttcttcgatgacagtttcggcccattctataaatccgaacagatattcata
acgcagtcttctggatcacctgtcaactatgatactcttgactggtggctcaaagtagaa
accgaaatcaatgccctcaagacgagcgatgggattgggttggaggatatttgctttgca
ccagctggcaaggggactccttgcgtaatacaaagtgtttcggcctggcttggagatgac
atggaagtatggggggaagaatgggaatcgcgtgtgcgcgactgtgcgtctaggccggga
gaatgtttgccaccattcggacaacccattgaccccaaacttgttctcggaggagccaat
ggagattggctggaagccaaggctttggtagttacttgggtagtcaacaattacaatgac
gaacgggtcgagccagcagaacaatgggaaaggaagctgcgcgattatctgagagacttg
aaacggcctgggataaagattagctactccacgggagttagtctggaagaggagatcaac
aagagcaccaacaccgatgtcaagatcgtcgtgctatcttatctcgtcatgtttttctat
gtctcgctcactcttggaggtggtcttccacccagtatgatacaagctttcacccataga
gcctatcgccttgtttttcggattggggtgcttttgcacctggtaaaagatgcccctctc
gaggaatctgcacctccgccggatttcagagttatccctaccctactttccgtcaactcg
aaattttccctggggttgtttggcattgtcattgtccttatcgctgtgtcctcttcggtc
ggtcttttttccttgttgggcgtacgggtcactttaatcatcgccgaagttataccgttc
cttgtcctcgcagtgggcgtcgataacgtgtttatcttggtacacgaacttgaacggcag
aataatttacatgctgcccaacagccaggtgacgacgaatctgttcatagcaacggagct
caaccctctggcacattccttgctcccgaagagagagtggcccgggcagtagctaggatg
ggtccatccatcatgttaagctcagttaccgaagtggtagcttttgccctcggcgcttta
gttcctatgcctgccgtacgcaattttgctatctatgctgctggtagtgtcctctttggt
gcaataatgcaatgtacggtttttgtcagcgcaatgacgctagatttgcgacgttcggag
tctatgcggattgattgcttcccctgtatccgcctcagacctcctatcggtctttacgat
aacgaggccccatcacgtgaaggtatggtcaagaagttcatgcgcacagtatacgcgcct
tcgctactccgtcatgaggtcaagcagttagttttggtggcattcggaggtctatttttg
gctgccatcatcgggatccaacatatcagtctcggtcttgatcaacgtctggccctccca
tccgaatcacatctggtcccatacttcaatgatgttgattcctatcttgatgttgggccg
cctgtgtactttgtcactgaaggaggtgatccatcttctagacatggacagcagcaactt
tgtggccgcttcactacgtgcctcgaattatctgtagccaatactctcgaagcggagcgt
aaacgtccagatagttccttcatcgcgtccccccccgctgcttggatcgatgactttttg
cagtggaccaatcccacttttgagagctgttgcagagtcagaaggcgagacccgaccatt
ttctgttcgcctaaagactcggaaaggctctgtaggccttgtttcgaaggtcaaaaatgg
gactcgacaatggacggtctacctgaaggagaagactttatgcgataccttgaacaatgg
ttaatttcaccaacaaatgatgagtgtccactgggtggacaggcgccttacagcgcagca
gtaaaactggtttcaagcaataccactgtcgctgcttcccattttaggacctaccacacc
ccactcaaatctcaagcagactttattaatgccttggctgcggctcgacgaatctctgac
gatatcactcatcgaaccggtgtcagagtgttcccatattcattgttctatgtctttttt
gatcagtacgagcacattatttctatggctatccaagttcttttcctcgcttttgtcgct
gttctagtgataacatctacactcctcggttcttggcgtactggcgggaccgtaaccttt
acgtgtgcgctagcggtcattaatgtcatgggtgtgatggggtattggggtatctctttg
aatgctatatctttggtcaatttggttatcagtttaggaatagctgtggagttctgttcc
catatcgcaagggctttcatgggggcaggatctggcctgccgttggacaaagtggaagga
cgtaaagagagggatgagcgagcgtggaccgcgttggtagatgtaggaccatctgtgttc
tcgggtatcaccatgaccaaacttatcggcatatctgtcttggctttgactcgttccaag
ctcctggaagtatactacttccgcatgtggctttctctgatcctatcgggggcactgcat
ggtttagtactgctgccagttcttttgagttaccttgggggtcaaggatacccattggag
gatacagatgaggattgggtcactagtcaaatgagacggccgatggattacgagtatgcg
ccttttgcagatacagactcggtagatgattag
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