Cryptococcus deneoformans JEC21: CNE03080
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Entry
CNE03080 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
CNE03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNE03080
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CNE03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
3257572
NCBI-ProteinID:
XP_570857
UniProt:
Q5KGM6
LinkDB
All DBs
Position
5:join(877229..877460,877498..877829,877879..877968,878049..878270,878315..878497,878537..878800)
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AA seq
440 aa
AA seq
DB search
MSKKSDLLVRVRYLNPLPNPPFPPKLLNVNTNISRLGEPAYLDQLAATTPLPMLVDSEMG
MPLDLNAYDGAWDGKDQSLNPIPDSDRVHHPVDLTLLAPFNPPSTSNGDLKSVPSSNEVS
WMRNSSYLTRRNNAKRKDAAEIREEVAVDASEAAQLLMIEKTFLDITSQDVNQLQHPNPK
KRHLKVVESYDVLPDDEAWPNNYILLRFPERPSAATAINPAAGASSPRLSKSILRPIVQD
DQQMMEFYLPQEEDLPKLDEAYGRAVDEEPLEKIMRLNEENPNDPEIDHIFSNVYYDRIR
TYEVVSTSAPKKEILVSFQEGEENDNEPATKKRKGVYYKEINFRTLLRKTRTKPHDEVDG
QSDRWDKSRVGFRLPSQADIDHRDEAKSQVADPTWANEELRRIHGGDNMAEGQGEAIDDE
EVGVDEGAIEAERGAHDESE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagtctgatctcctcgttcgtgtacgatacctcaacccgcttccaaatcct
ccattccctccaaagctcctcaatgtcaatacaaacatctccaggttaggggaacccgcc
tacctcgaccagctcgcagccactaccccccttcctatgctcgttgattcagaaatgggt
atgcctctggacttgaatgcctatgacggtgcatgggatggaaaagatcaatctttaaat
cctatccctgactccgatagagtccatcaccctgtagatctcactttgctcgcaccgttc
aaccctccgtcgacatcaaacggtgatcttaaatcagtcccctcaagcaacgaagtatcg
tggatgaggaattcaagctaccttacgagaagaaacaatgccaaaaggaaggatgctgca
gaaattagggaggaggttgctgtcgatgcctcggaggcggcccagttgttgatgatcgag
aagacatttttggatataacttcccaagacgtaaaccagttacaacatcctaatccgaaa
aagagacatttgaaggttgtcgagagttacgacgtcttgccagatgatgaagcatggcca
aacaactacattcttcttcgattccctgagcgaccttctgcagcgacagcaattaatccc
gcggcgggcgcgtcttcccctcgtctttccaaatctattctgcgccctatcgtccaagat
gatcagcagatgatggaattttatcttccccaggaggaagaccttcctaagctggacgag
gcttatggacgcgccgtggatgaagagcctttggagaagataatgcggttgaatgaggaa
aatcccaacgatccagagattgatcatattttttccaatgtctattatgaccgcatacgt
acatacgaagttgtctctacatcagcacccaagaaagagattcttgtttccttccaagaa
ggcgaagagaatgataatgagccagctactaagaagagaaaaggtgtctattataaagaa
attaatttccgaacccttttgagaaagacgagaacgaagccacatgacgaggtcgatgga
caatccgacagatgggataagagtcgcgtgggcttcagattgcctagccaggcggacatt
gaccatcgtgatgaagctaaaagccaggttgctgaccctacatgggcaaatgaagaactc
agacgaatacatggtggcgacaatatggctgaagggcaaggggaagcaatcgatgacgaa
gaagtgggagttgatgaaggtgcaatcgaggctgagagaggggcacatgacgaaagcgaa
tag
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