Cryptococcus deneoformans JEC21: CNE03320
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Entry
CNE03320 CDS
T00243
Name
(RefSeq) small nuclear ribonucleoprotein, putative
KO
K14564
nucleolar protein 56
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNE03320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNE03320
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
CNE03320
Prokaryotic type
CNE03320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
3257711
NCBI-ProteinID:
XP_570894
UniProt:
Q5KGK2
LinkDB
All DBs
Position
5:join(945513..946019,946070..946533,946592..946883,946936..947064,947118..947480)
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AA seq
584 aa
AA seq
DB search
MSGSLTHVLFEGPSGYGLFTVNLQEEVAAKSKQLQDSIADLGIFSRMVQLASFAPFTSAA
QALENANDVSEGVLNPHLQALLNLIVPDAAGKGNKKQSGVLLGVAERGLAGAIQGEMGIP
CDTSERALELIRGVRLHQEKILIKGGMQKGDVTVAQLGLGHSYSRGKVKFNVNRSDNMII
QAISLSDQLDKDLNTFFMRVREWYGWHFPELYKLVPDAHQYALLAVLIGDRTALSEDSLE
EMQEILDDDETRAKNVLDAARASMGSDISEVDLINISNFAERVVKLAEYRKSLRRYLTEK
MNVVAPNLSALIGETIAARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTKGNTPKY
GLIYHSTFIGRAGAKHKGRISRFLANKCSIACRIDCFTDVPTNKFGEALRAQVEERLNFF
ETGAPVGKNSDAIQKALAAVAADLDDEDDDDDDEGHLKEDDVADAVKQVEKDQAEAAVNR
GPIDPELAKLASEATSSTPKKEKKNKKEKKDKKEKEEKKKRKSEAMDVDVKEDEEEKKEK
KSKKEKEEKKEKKEKKEKKEKKEKEGREEKEGKKEKKKKRKSEA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctccctcacccacgtcctcttcgaggggccttctggctatggcctcttcact
gtcaacttgcaggaggaagttgctgccaagtcaaaacaacttcaagactccatcgccgac
ctcggcatcttctctcgaatggtccagctcgcttccttcgccccttttacttcggccgcc
caagctctcgagaacgcgaacgatgtctccgaaggcgtcctcaaccctcaccttcaggct
cttctaaatttgatcgtccccgacgctgctggcaagggcaacaagaagcaatccggtgtt
cttctcggtgtggccgagagaggtttggctggtgccattcaaggcgagatgggtatcccc
tgtgacacttccgaacgagccttggaactcatccgaggtgttcgattacatcaggaaaag
attttgatcaagggagggatgcaaaagggagatgtaaccgttgcccagcttggtttgggt
cactcttactctcgaggcaaggtgaagttcaacgtcaaccgatccgacaacatgattatc
caagccatttctctctccgaccaactcgacaaagatctcaacactttcttcatgcgagtg
cgagaatggtacggctggcacttccctgagctttacaagctcgttcccgacgcccaccaa
tatgcccttcttgctgtccttatcggtgatcgcacagctctttccgaggactctcttgag
gaaatgcaggaaattcttgacgacgacgagactcgtgcgaagaatgtcctcgatgccgcg
agggccagtatgggtagtgacatcagcgaagttgacttgatcaacatcagcaacttcgcg
gagagggttgtcaagcttgctgagtataggaagagcttgaggagatacctcactgagaag
atgaatgtcgttgcccccaacttgtcagctttgatcggtgagaccatcgctgccagactc
atcagccatgccggttccctcaccaacttggccaagtaccccgcttctactgtccaaatc
ctcggtgccgaaaaggcacttttccgagctctcaagaccaagggtaacacccccaaatac
ggtctcatctaccactctacttttatcggccgtgccggtgctaagcacaagggtcggatt
tctcgattccttgccaataaatgttctatcgcttgtcgtattgactgtttcaccgacgtt
cctaccaacaaattcggagaggctttacgtgcacaggtcgaggaacgtttgaacttcttc
gagactggtgctcccgtcggcaaaaactctgacgccatccagaaggccttggccgctgtc
gcagctgacctcgatgacgaggacgacgatgatgacgatgaaggtcatcttaaggaagat
gatgttgcggatgctgtcaagcaggtagagaaggaccaagcagaagctgccgttaaccga
ggccctattgaccccgaacttgccaaacttgcttctgaggctacatcttctacgcctaag
aaggaaaagaagaacaaaaaggagaagaaggacaagaaggagaaggaggaaaagaagaag
cgcaagtccgaagccatggacgtggatgtgaaggaggatgaggaggagaagaaggagaag
aagagcaagaaggagaaggaggaaaagaaggagaagaaggaaaagaaggagaagaaggag
aagaaggagaaagagggaagggaagagaaggagggaaagaaggagaagaagaagaagagg
aagtctgaggcgtag
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