Cryptococcus deneoformans JEC21: CNE03710
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Entry
CNE03710 CDS
T00243
Name
(RefSeq) vacuolar protein sorting-associated protein vps27, putative
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03250
Viral life cycle - HIV-1
cne04144
Endocytosis
cne04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNE03710
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CNE03710
04145 Phagocytosis
CNE03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cne04131
]
CNE03710
Membrane trafficking [BR:
cne04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
CNE03710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
UIM
UIM_2
FYVE_2
USP_UIM_N
C1_1
DZR_2
Motif
Other DBs
NCBI-GeneID:
3257686
NCBI-ProteinID:
XP_570941
UniProt:
P0CS26
LinkDB
All DBs
Position
5:complement(join(1053876..1054948,1054996..1055730,1055781..1055901,1055954..1056052,1056111..1056283,1056335..1056386))
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AA seq
750 aa
AA seq
DB search
MSWLWGSTTNPQFEELAEKACSPLNLPYPQSEDIATALEVADMIRSKAIQPKMAMQSLKK
RIASKNGRVQMYAIGLTDTCIKNGGDHFLLEVASKEFVDELSNLIKATTTSPEVKQMLIK
YFQQWALAFKSKSELSFFVEVYNELRASGITFPPPPAPVPSHLLTTTTAPAWVDSDACMR
CRSAFTFTNRKHHCRNCGLVFDQACSSHSMPLPKYGITEEVRVCDGCWAKAGRNKADAPA
PAVPGRTPRSRADLDADLQRAIELSLAESQHSQNRHHSHFTPSEPPLAHGTVEDEDEQMR
LAIEASLRDMEARPSAPAGLGEAPEPEYRPLPTFDLSPRENETILTFSNTMDQMAAYGER
DLRRFPHAHVLAEQANTVGGRLRRNVEEKSTKQQMLMEMQDKLSQAVNLYGQILDGQQAY
AAKRAHEEQARRYQQQQSYYTQQYQPQPQLYGQYPPNGYQAFVPPQQAYQPPQPQPEAQA
QHAPSLYPTMPYTTPNFTSPPQERVYPQQSHSSPYSQWSPAPSHVQPGLARQASVVVPPV
SSPVPAGVQRQASMTYGAPIPVAEQSQRQQQQYASAPPFASGAAPVDIPSAPPPVNLSTH
PNSPQRHSYIPSHPQTQTQTQYESQPQEIPSQQDMQYGASAPPPDSLGSYVSEGTVGSAK
SGLEQEHAASQIQPQPQPQASAQTQTQSQSQLQAQPQQNQYAAQTQLPAGMYNAASFPQP
LPPTIFPDAPVEAPKGLEKEEKEEALLIEL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggctatggggaagcactacaaacccgcagttcgaagagcttgctgagaaggcg
tgttctcctctcaacctcccgtacccacaatcagaagacatcgcgaccgccttggaggtt
gcagatatgatccgctcaaaggctatacagcctaaaatggcaatgcaaagcttgaagaag
aggatagccagtaagaacgggagagtacagatgtatgccatcggacttacagacacctgt
atcaagaatggaggagatcatttcttgctagaagtagctagcaaagaatttgtggatgag
ttgtcaaacctcattaaagcaacaacgactagcccggaagtcaagcagatgcttatcaaa
tactttcaacaatgggcccttgctttcaaatccaagtcagagctatccttctttgtggaa
gtctataatgagctcagggcttctggaatcactttcccaccgccacccgctcctgtccct
tctcatctcttgacaacaaccactgctcctgcatgggtcgactctgatgcgtgcatgcgc
tgccgctctgccttcacatttactaaccgtaaacaccactgtcgcaactgtggtctcgta
ttcgaccaagcgtgctcgagccacagcatgcctttacccaaatatggaatcacggaagag
gtccgagtgtgcgacggctgctgggctaaagctgggaggaacaaggctgatgctcctgcc
cccgctgtccccgggcgtacgccaaggtctagagcggatcttgatgctgatcttcaacga
gccatcgaactctctctcgcggaatctcaacatagtcagaaccgccaccacagccatttc
acgccttccgagcctcctctggcgcatggcactgttgaagatgaggatgagcaaatgcgc
cttgcgattgaggcttctcttcgtgatatggaggctcgtccatcagctccagcgggcctc
ggtgaagcgccagaaccagaatacagacctctgccaacattcgacctttccccaagagag
aatgagacgatcttgacgtttagcaacacaatggatcagatggcggcgtacggtgagcga
gatttgagaaggtttccacatgcacatgtgttggcggagcaggctaatacagtgggcggg
aggttgaggaggaatgtggaggaaaaaagcacaaaacaacaaatgttgatggaaatgcaa
gataaactgtcccaagctgtcaacctctacggtcaaattctggatggacaacaggcttat
gctgctaaacgggcgcacgaagagcaagcgaggaggtatcaacaacagcagagctactac
acccaacagtaccagccgcaaccgcagctgtatggccaataccctcctaacggctaccaa
gcattcgtgcctcctcaacaagcctaccaaccccctcagcctcagcccgaagcccaagct
caacacgcaccctccctttaccctacgatgccttatactactcccaattttacttctcct
ccccaggaacgggtttaccctcaacaatcccattcatcgccttacagccaatggtctccc
gcgccatcgcatgttcagccgggattagcaagacaagcgtcggtcgttgtcccgcccgtt
tcttcacccgttcccgctggtgtgcaaagacaggcttctatgacttatggtgcacctata
cctgtagccgagcaatctcaacgacaacagcagcaatatgcctctgctcctccgttcgca
tctggagcggcacccgtcgacataccttccgctcctccacctgttaatctctccacccac
cccaactcgccccagcgacactcttacatcccttcccatccccaaacccaaacccaaacc
cagtatgaatctcaaccacaagaaatcccgtcacagcaagatatgcagtatggcgcgtcg
gctccgccgccagactctttaggttcgtatgtgtcggaaggaacggtaggaagcgccaag
tcggggcttgaacaggagcatgcggcttcacagattcaaccccaacctcagccccaggct
tccgcacaaactcaaacacagtctcaatcccaattgcaggctcaaccccagcaaaaccaa
tacgctgctcaaacacagctccccgcgggaatgtataacgctgcctctttccctcaaccg
ttacccccaaccatcttcccagatgcgcccgtagaagcacccaaaggtttggaaaaggag
gagaaagaagaagctttgttgattgagctttga
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