Cryptococcus deneoformans JEC21: CNE04020
Help
Entry
CNE04020 CDS
T00243
Name
(RefSeq) chromatin remodeling-related protein, putative
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNE04020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNE04020
03036 Chromosome and associated proteins [BR:
cne03036
]
CNE04020
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CNE04020
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CNE04020
PBAF complex
CNE04020
GBAF(ncBAF) complex
CNE04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Trypan_PARP
SANT_DAMP1_like
DUF7573
Motif
Other DBs
NCBI-GeneID:
3257820
NCBI-ProteinID:
XP_571052
UniProt:
Q5KGD3
LinkDB
All DBs
Position
5:complement(join(1136013..1137467,1137517..1137923,1138001..1138193))
Genome browser
AA seq
684 aa
AA seq
DB search
MSTPKISLRISTPADADSQQEQQAEATGQGVQTHDVASAPGKEKEREPHYGGEIANISVP
VDNGEPSATPRDAAATETPAEETPAPEPERPTPAQLHDLATTYLAAQTHPLVIPSYSSWF
SLTTIHPIERRSLPEFFSSRNRSKTPSVYKDYRDFMINTYRLNPGEYLTVTACRRNLAGD
VGAIMRVHAFLEQWGLINYQVDPDTRPAALGPPFTGHFRVTLDTPRGLSNLLHPGVKPGA
GALSQTNGVTPHPSNLDLRKTIYHSTPRTTKPVSAEDATKLASTNGDVPKSKTYVCETCG
TDCTTTRYHSLKDGEYTICPSCFVSGRFPSTMYSGDFVRLDEEAFKHASASVGADWSDQE
TLLLLEGIEMFDDDWQAVADHVGSRSKESCISKFLQLPIEDPYLTQEPAADLGPLRYQAG
MNGLPFEGGENPVMSVVAFLASQVGPAVAAAAAQSALGELAKGLKRKRSEGEKEGEKEGK
VAKNDEEKKESDEKKKESDEEKEKEKEGEAEPMAVDEATEQPTEPSTAPVENTETEANPS
VPSASDLSRAATLALSSAATKASALASHEDHRISQLVSRLVTVQTRKVELKLSMFERLEE
LLENEKRSIELARQNLFRDKQTVKKQLAQVEELLKKAKEGDKGVEGEVAGLKKDIETGST
AEAVKEVQATNEPAVEGDTTLGKL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccaagatatccctccgcatatccacgcccgcagacgcagacagccagcag
gagcagcaagcagaggccacaggccagggcgtgcagacccacgacgtcgccagcgcgccg
gggaaggaaaaggagcgagaaccgcattacggcggggagattgccaacatcagtgtgccg
gtcgataatggggaaccgtcggccactcctcgcgacgccgccgcgacagagacacccgca
gaggagacaccagcaccggaacccgaacggccaacgccagcccagctgcacgacctcgca
accacctatctcgctgcccagacccacccgctcgtcatcccttcttattcttcatggttc
tccctcaccactatccacccgatcgagcgtcgttccttgcccgagttcttctcttcaagg
aacaggagcaagacgccgagcgtgtacaaggactatagagatttcatgattaacacatac
aggctgaaccctggagaatacttgacggtgacggcgtgcaggaggaatttggccggtgac
gttggcgcgatcatgagggtgcatgcctttttggaacagtggggattgattaattatcag
gtcgaccccgacactcgaccggcggcccttggtcccccttttactggccacttccgggtc
actctcgacacccctcgtggcctgtccaacctcttgcatcccggtgtcaagcccggtgcc
ggcgccttatcgcagaccaatggcgtcactcctcatccgtccaacctcgacctccgcaaa
accatctatcactccacccctcgcactaccaagcccgtttctgccgaagacgcgacaaaa
ctcgccagcaccaatggcgacgtgcccaaatccaagacttatgtgtgtgagacttgcggt
accgattgcacaacgacaagatatcactcgctgaaggatggcgagtacaccatttgtccg
tcatgttttgttagtggacggttcccttccaccatgtactctggcgactttgtccgtctc
gacgaagaagcattcaagcacgcttcagcttctgtcggcgccgactggtcagaccaggaa
acattgttgcttcttgaaggtatcgaaatgtttgatgacgactggcaggctgttgccgac
catgttgggagtcgttccaaagaatcttgcatctccaaattccttcagttaccgatcgaa
gacccgtatctcactcaagaaccggctgccgatcttgggccgttgagatatcaggctggt
atgaatggattaccgttcgaaggcggagagaacccggtgatgagcgtagtcgcgttcttg
gccagccaagttgggcctgctgtagcagcggctgcagcgcagagcgctttgggagaactg
gccaagggattgaagaggaagagaagtgaaggagaaaaggaaggggagaaagagggcaag
gttgcaaagaatgacgaggagaagaaagaaagtgacgagaagaagaaggagagtgacgag
gaaaaggaaaaagaaaaggaaggcgaggctgagcctatggctgttgacgaggccacagaa
caaccaacagagccttcaacagctccagttgaaaatactgagactgaagccaacccctcc
gttccctctgcatctgacctttctcgcgccgccactcttgccctttcctctgctgccaca
aaagcatccgctctcgcttcccacgaggatcatcgtatctcccaactcgtctcccgtctc
gtcactgtccaaactcgtaaagtcgagctcaagctatccatgtttgaacgtcttgaagaa
ttgcttgaaaacgaaaagagatcgatcgagttggcgaggcaaaacttgtttagggataag
caaacggtcaagaaacagttggcgcaggtggaagaattgttgaaaaaggcgaaagaggga
gacaagggggtcgaaggggaagttgccggtttgaagaaggacattgagactggaagcaca
gcggaagcggtcaaagaagtgcaggcgactaatgagccggcagtagaaggtgatacaacg
ttgggcaagctctag
DBGET
integrated database retrieval system
