Cryptococcus deneoformans JEC21: CNE04060
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Entry
CNE04060 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CNE04060
Spliceosome [BR:
cne03041
]
Common components
Common spliceosomal components
General mRNP proteins
CNE04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
3257987
NCBI-ProteinID:
XP_024512936
UniProt:
Q5KGC9
LinkDB
All DBs
Position
5:complement(join(1145804..1145938,1145992..1146163,1146218..1146498,1146552..1146789,1146841..1146950,1146997..1147048,1147100..1147389,1147439..1147937,1147990..1148060))
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AA seq
615 aa
AA seq
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MSATPPRSSYQSANGGDKTPELTTKREKRHREDDEDDRDVSGRSHRYRPEDVRDYDRDRS
DRGDRDRDRERRHRHRRRDETEEERKERHRRREEETEEEREERHRRRRERELRERERERE
GEDDYRRGSREMSVGRPLSHRDRSRESHRSYRSHRDRDEMPPIRPMSREPRDMAEERREN
DRRREMHFADLERDGRMRSPPPRRRRLSPEYGGPRGPPPRRPPPPPRDPATALIEEVDSE
ARSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVDLVN
KALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGGRSSVPFTQNYP
PLSTGLALPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHTDL
SGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTIQERGTYQTPDLIEDSGNYGT
RLDANQRQQLMFKLARTEPNVNLSLSAPKINGSQSKIPAMDPTPRIVVHNMFNPEEETER
NWDLDLAEDVKGEVESKYGRVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGRQ
LQAGYITEALFNAHL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaactccacctaggtcttcttaccagtctgccaatggtggcgacaagactcct
gagctcaccactaaacgtgagaaacgccatcgtgaggatgatgaagatgatcgtgacgta
tccggcaggtctcatcgatatcgtcctgaagacgtccgcgactacgaccgtgacagaagt
gataggggagacagggaccgggacagagagaggcgacaccgccaccgacgccgtgacgaa
actgaagaggaacgtaaggaacgccaccgtcgacgtgaggaggagaccgaggaagaacgc
gaggagaggcatcgacgaaggagggagcgtgaattgagggaacgcgagcgtgaacgagag
ggcgaggacgattatcgtcgaggatcgagagaaatgtctgtgggtagacccttgagccat
agggacagatcaagagagagtcaccgcagttataggagccatcgcgacagggacgagatg
ccccccattaggcctatgagtagggagcctagggacatggcagaagagcgtagggaaaat
gacaggcgtagggaaatgcattttgcagaccttgaacgtgatggtcggatgcggtctccg
cccccacgacgccgtcgtctttcgcccgagtatgggggtcctcgcggtccgcctccccgt
cgtccgcctcctccccctcgtgacccagctacggctttgattgaagaggtagactctgaa
gctcgttccatctttgtctcacaactttctgctaggatgacttcccaggttctcggcctg
ttctttgaagacaaacttggcaggggtgctgttagagacgccagagttgtgaccgacaag
gttgctaggaggtccaaaggtatcggatacgttgagttggatagcgttgacctcgtaaac
aaggctcttgctctttctgggacggttgtcatgggtattcctattaatatcatgcttacc
gaggcagaaagaaaccattccggcactgaacttatcactgctactgcccttgcgagcaac
gcgcgatctcatggtggtggtggtggtcgttcttctgttccgttcactcagaactatcct
cccctctccaccggtctggctcttcccccaggtcttgaccccgacgctcacaaggacgct
gctatcccttatcaccgtcttttcgtctccaatctcgctttctctctgaccgctgatgat
gtgaggcaggtgttcgagccgttcggcgagattgagtttgtcgatcttcacacggatctt
agcggactgaggaagggtacagcttacgtccagttcaaagatgtcaagtctgcacaaatg
gcccttgatgcgatggctggatttgacctcgcaggacgtctcatcaaggtccagactatt
caagaacgcggtacttaccagacaccagacttgatcgaagatagtggcaactatggcacc
cgacttgacgccaaccagaggcaacagctcatgtttaagctcgccaggaccgagcccaat
gtcaacttgtcgttgtccgcccccaagattaacggttctcagtccaagataccagcgatg
gaccctactcctcgaatcgttgttcataacatgtttaatcccgaagaagaaaccgagagg
aactgggatctggaccttgccgaagacgtcaagggcgaagttgagtccaagtacggcaga
gtcaagaggattaaggtcgagaagatgtctgcaggcgaggtgtacattgaattcattgac
actgactccgctatcaaagctgtcaagggcctcaatggtcgattctttggtggacgccag
ttgcaagcaggatacatcaccgaggctttgttcaatgcgcacctctaa
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