Cryptococcus neoformans var. neoformans JEC21: CNE04220
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Entry
CNE04220 CDS
T00243
Name
(RefSeq) nonhistone protein 6, putative
KO
K22483
transcriptional regulator HMO1
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cne03000
]
CNE04220
Transcription factors [BR:
cne03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Other HMG box factors
CNE04220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
YABBY
CHDNT
Motif
Other DBs
NCBI-GeneID:
3257995
NCBI-ProteinID:
XP_024512939
UniProt:
Q5KGB4
LinkDB
All DBs
Position
5:join(1178360..1178404,1178462..1178839,1178903..1179049,1179102..1179230,1179284..1179307)
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AA seq
240 aa
AA seq
DB search
MSAPSWEEMEAKRIEMIQSLREVSSAMTRCVHVIEEYTSLSPVNLSKPDLLQPLTAGGPL
AVALASGLADAGVGGTGKKERKKKEKKIRDPNAPKRPPSAYILFQNEVRDDIRTSNPGMP
YKDVLQIISQRWKELPDSEKKIFEDAYAAAHNNFRAEEQAYAKKDAVEVDPVLMESSDDS
SDDDSSEGGSTPAAPIPAPTLAAAEKNKKDKKRKTKEEEAAVNAVLGENKDKKKKKKSKD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcctagctgggaagaaatggaagccaagcgaatcgagatgatccagtctctt
cgcgaagtctcttctgccatgacgcgctgcgtccatgtcattgaagagtacacctccctc
tctcccgtcaatctctccaagcctgatctcctccaacctcttactgccggtggccctctt
gccgtcgctcttgcctctggattggctgatgccggtgtcggaggtactggtaagaaggag
cgtaagaagaaggaaaagaagatcagggaccccaacgcccccaagaggcctcctagtgcc
tacatcttgttccagaacgaagttcgtgatgacattaggacctcaaaccctggaatgcct
tacaaggatgtgttgcaaataatctctcagaggtggaaagagttgcctgatagcgagaag
aagattttcgaggacgcctatgccgccgcgcacaacaacttccgagctgaagagcaggcg
tatgccaagaaggatgccgtcgaggtggaccctgttcttatggaatcttccgacgactct
tctgacgatgactcctccgaagggggctctactcccgctgctcctatccctgctcctact
cttgcggccgctgagaagaataaaaaggacaagaagaggaagaccaaggaggaggaagct
gctgtgaacgccgtgctgggtgagaacaaagacaagaagaagaagaagaagagcaaggat
taa
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