Cryptococcus deneoformans JEC21: CNE04260
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Entry
CNE04260 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNE04260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNE04260
Enzymes [BR:
cne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CNE04260
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CNE04260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clp1
CLP1_P
CLP1_N
AAA_16
AAA_28
Dynamin_N
ATPase_2
Arf
SRPRB
PduV-EutP
POP1_C
Motif
Other DBs
NCBI-GeneID:
3257560
NCBI-ProteinID:
XP_571080
UniProt:
P0CM76
LinkDB
All DBs
Position
5:join(1185348..1185446,1185839..1186204,1186258..1186507,1186562..1187381,1187432..1187543)
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AA seq
548 aa
AA seq
DB search
MAEQQTTELTNIDLEAGSEWRFELEADENIALRTLSSDPVFINSQELTPSAWYPIYRHTK
SALYAPTSARIQVTNLPASHYTSTSTVQPQLLNLHLAMERQRILSKRGMEQRGPRVMIMG
PQSSGKTTVMKNLVNLALGTGMGWTPGAIGLDPSSPPNLIPGSLSISTPSHPIPTHHLAH
PLGSPPASTAANTISGDVETASWWLGALEPTNKNAEVWRVLVEHMAEAWGMRCEKDKIAN
ISGLFLDTPAAFTVPTLGTKKDDPKARYTLVSHAIQAFDIDTIIVIGHEKLHIDLSRLPL
VQSRQLNVIRIPKSGGAVDLDDHDRETAHIFQVRTYFYGEPPLPPQISSLVGKMVSLDFE
LSPYSFQIPWSRLVVLRVGEENSAPSSALPLGSSKILSPLRLTRVDPSGPGHVVRLLNRV
LALVDVKPEDRIVPAKESEVKEEVKEEKNEKDGEIKQDGEGEKKGEGKGEGEGEGEGKDG
EEEGEAEGEDDEEEVPFREEIGTREVMGFIVITAIDTFARKYTVLSPTPGRLPTTVAIAG
AIEWVDSA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaacaaactactgaactcacaaatatcgacctcgaagccggatcagaatgg
agatttgaactcgaagcggatgaaaacattgcccttagaactctctcttccgatccagta
ttcatcaactctcaagagcttactccttcggcatggtatccgatctaccgacacacaaaa
tccgccctctatgccccgacttctgccagaatacaggtgacaaacctcccggcatcccat
tatacatccacatccaccgtccagccccagctattgaaccttcatctggcaatggagcgc
cagcgaatactgtccaagagaggaatggaacagagggggcctcgagtaatgatcatgggc
cctcaaagttcaggaaagacaacggtcatgaagaacttggtcaatttagctttagggacc
ggtatgggctggacacctggtgcgattggtctagatccgtcaagtcctcctaatcttatc
ccgggaagtttgtccatctccacaccatcacatccgatccccacccatcatttggctcat
cccttgggctcaccgcccgcttctactgcggccaatactatctccggggatgtagaaaca
gctagctggtggcttggagctcttgaaccaacaaacaagaatgctgaagtatggcgggtt
ctggttgagcacatggcagaagcttggggaatgagatgcgaaaaggacaagattgcaaac
atctctggcctcttcctcgatactcctgcggcattcactgtccccactctcggcaccaag
aaagacgaccctaaagctcgatatactttggtaagccacgctatccaggcatttgatatc
gacactatcatcgtcattggccacgaaaagttacacattgatctctcccgtcttcctctt
gtacaatcacgccaactcaacgtaatccgtatccctaaatcaggcggcgccgtcgacctt
gatgaccatgatcgcgagaccgctcatatcttccaagtccgaacctacttttatggcgaa
ccccctctgccgccacaaatctccagcctggtagggaaaatggtgtctctcgatttcgaa
ttatcaccatactcgttccagattccgtggagcaggcttgtcgtcctccgtgtcggagaa
gaaaactcggccccgtcgtcagccttgccccttggttccagcaagatactttccccttta
agattgacgagagtggatcccagtggacctggacatgtggtgcgactgttgaatagagtc
ttggcattggtggacgtcaagcctgaggataggattgtgccggcgaaggaatcagaagta
aaggaggaagtgaaggaagaaaagaacgagaaggatggggaaattaagcaagatggtgaa
ggagagaagaaaggggaagggaagggtgagggcgagggcgagggtgaaggaaaagacggc
gaggaagaaggtgaagctgaaggtgaggacgacgaggaagaagtaccgttcagggaagag
attggtacaagggaagtgatgggtttcatcgtcatcactgccatagatacattcgctcgc
aagtatactgtgctatcaccgacgccaggtcgtttgccaactaccgtcgccatcgctggt
gctatcgaatgggttgactctgcttaa
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