| Entry |
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| Name |
(RefSeq) DNA binding protein, putative
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| KO |
| K08734 | DNA mismatch repair protein MLH1 |
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| Organism |
cne Cryptococcus deneoformans JEC21
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cne00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CNE04630
03460 Fanconi anemia pathway
CNE04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cne03400]
CNE04630
DNA repair and recombination proteins [BR:cne03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CNE04630
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:complement(join(1293783..1294085,1294171..1294332,1294402..1294558,1294625..1294739,1294794..1295232,1295289..1295442,1295494..1295587,1295642..1295990,1296048..1296141,1296195..1296505,1296564..1296683))
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| AA seq |
765 aa
MSEDSMDIDLRPEVEEIEPEGPKPIHRLTKDVINQIAAAEIIHRPSNAIKELLENSLDAG
STSIKISVKDGGLKLLQITDNGHGINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEA
LASISYCSHVEVVTKTKNEGCGWKAHYQDGSLIPAKPGGTADPKPAAANDGTVITAADLF
YNMPLRKRAFKSTSDEYNRIIDVVTKYAIHNPHVAWVCKKAGTALPDVATQVGSNTKANI
AALYTSALANELLEIPESELQPARLGAKLKGWVSNANSSWSKKGGWLLFINNRLVDSNKL
KKAVEGHYTSYLPKGASPWAYLSLQIDPAKIDVNVHPTKSEVRFLNEDEIVDAVVQAVQT
ALEGANLSRSFTVQTLLPGAPTPLGKRESSNSTIASASFSTRKAAPNYKVRMDPSNRTLD
SMFTVIDPSQLSGFVEDGELQEQERPSKRRNVDPEFQGDESIVLDDDNDDEGQAEEGERE
QVFADEGESAKGKAKEIEESVCHFTSIQSLRRAVKRDGNAELHEIFQRHAFVGVVDRYQC
LSLIQHSTKLFLVNHGSLGDEHFYQLGLRQFGAFNRIRLDPAPQLKELLTLAAEDEPGLL
EAGLEVESVVDYIASLLRDRQEMLDEYFSLLITEDGKVETLPMLLKGYTPNLDRLPHFLL
CLGTQVDWDNEKECFQTFLRELAFFYSPRPFEDQPPPPHTKDENMTGDELEGVEPTPEEI
QHQLWQLEHVLFPSFRRHTVWPKSCMTHVNQLADLPDLFRIFERC |
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| NT seq |
2298 nt +upstreamnt +downstreamnt
atgtcagaggattctatggacatcgatctacggccagaagtagaagaaattgaacccgag
ggcccgaaacccatacataggcttacaaaagatgtcatcaaccagatcgctgctgccgag
attattcatcgaccgtcaaatgctatcaaggagctccttgaaaactctctagatgcaggc
tctacatctatcaagatttcagtcaaggatggaggtctgaagctcttgcaaatcaccgat
aacggtcatggcatcaacaaagatgacttgccccttctttgcgagcgctacgcgacttca
aagctgcaaaagtttgaggatctccagtcgttagggacatatggctttagaggcgaagct
cttgcaagtataagttactgcagtcacgtcgaagttgttacgaagaccaaaaacgagggg
tgtggctggaaagctcactatcaagatggcagcttgatcccagcaaagcctggaggtacc
gcagacccgaagccagcggctgccaatgacggaacggtcatcacggctgcagacctcttt
tacaacatgccacttcgtaagcgggcattcaagtcaacctcagacgaatataaccgtatt
atcgacgtggtcaccaaatatgccattcataatcctcacgttgcgtgggtatgcaaaaag
gccggcactgctttacctgatgttgccacccaggtcggttcgaataccaaggcgaatatc
gcggcactctacacatccgcactggccaatgagttgctagaaataccagagtctgaactg
cagcctgctaggctaggtgcaaagctaaaaggctgggtgagtaatgcgaatagtagctgg
tcgaagaagggggggtggttacttttcattaataataggctagtcgattcgaacaagttg
aagaaagctgtagaaggccactacacctcgtacctcccaaaaggtgcttcgccctgggca
tatctcagtctgcaaattgaccccgcaaaaattgacgtgaatgtacatcccacaaagtca
gaggtccgttttctcaatgaagatgaaattgtcgacgctgtcgtgcaagccgttcaaacc
gctctagaaggtgccaacctctcgcgttctttcaccgttcaaactctgcttcctggtgcc
cctacacctttaggaaaacgtgaaagttcaaattccactatagcatctgcatcattctct
acccgcaaagcagctccaaactataaagtccgcatggacccgtccaaccgtaccctcgac
tccatgttcactgtcattgacccctcccaactctccggttttgtcgaagacggagaattg
caggaacaagaacgaccttccaaaaggaggaatgttgatccagaatttcaaggtgatgag
tccatagtactggacgatgataacgacgacgagggacaagcagaagaaggggaaagagaa
caagttttcgcggatgaaggggaaagtgcgaaagggaaagcgaaggagattgaggagagc
gtatgtcattttacaagtatccaatctttgagaagggcagtcaagagggatggaaatgct
gagcttcacgagatctttcaacggcatgctttcgtcggagttgtcgatcgatatcaatgc
ctttcgcttatccagcatagcacgaagctattccttgtcaaccatggctcattgggtgat
gaacatttttatcaacttggtcttcggcagttcggcgcatttaaccgtatacgccttgat
cctgccccacagttgaaggagcttttgacgttagcggcagaggacgagcctgggctgctt
gaagcagggttggaggtagaaagtgttgtggattatatcgcaagcttgttaagagaccgt
caggaaatgctggacgaatatttttcccttctcattactgaagacggaaaagtggagacc
ctccctatgttgttgaaaggatatactccgaatttggatcggttgcctcacttcttacta
tgccttggaacacaagtggactgggataatgaaaaggaatgtttccaaactttccttcgc
gaactcgcattcttctattcccctcggccttttgaagaccaaccccctccaccgcacact
aaagatgaaaacatgaccggagacgagttagagggtgtagagcccaccccggaagagatt
cagcatcagctctggcagctcgagcacgtcttgttccccagctttagacggcacacagta
tggccaaagagctgtatgacgcatgtcaatcaactggccgatttgccggacttgtttagg
atctttgaaagatgttaa |
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