| Entry |
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| Name |
(RefSeq) helicase, putative
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| KO |
| K15192 | TATA-binding protein-associated factor [EC:5.6.2.-] |
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| Organism |
cne Cryptococcus neoformans var. neoformans JEC21
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| Brite |
KEGG Orthology (KO) [BR:cne00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cne03021]
CNE04710
Transcription machinery [BR:cne03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
CNE04710
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:join(1316221..1316231,1316282..1316962,1317019..1317798,1317849..1318566,1318617..1319655,1319705..1320031,1320091..1320453,1320508..1321080,1321133..1321511,1321567..1321995,1322050..1322226,1322301..1322370)
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| AA seq |
1848 aa
MSFRQDKLILLLDSGSSQQIRQTAAKQIARIARTSFDAATSKPDAKPHVDGDSSITVHSS
GAEQDAWNDTLETISKILALFKSKSSETRHAAAHAIGLLAKSMPEYIEIASMSRAFLTSQ
PTDLPSTLKHGQMLLASAGREYAAKPLPGDKAKRRKAMMASVGLGDAVGWGEDTDKVLDD
DDDDMEDVRKTAPPSREPSVPPPDVFEGLSARQITMLKRKKGTNIMEEANKMRRLNEKAV
GNGSSSAAPSRANSPPLPESSATPDLKAEVITIDPGAKVRAAEAGGQIDPALDTEGNPLA
SSKTLTITSGQSPWTTVLLEVIPDLHDTTWQTRHGSALVIMEILRSLGTSYANAHPELYV
ALSRQLLSLLVLDRFGDFVGDTVIAPVRETAAQTLGVVLKYISTPGVKEIHQTLMGMVRQ
PWAKRGKEAENSQKADKFAWEVRHAGLLGLKYEVAVRGDLLSTKMEEDVKPDVEMGDFNL
LDDVVNAAILALGDADDDVRTVAASALTPIAETLASQLPTEELAKLLQSLWDCLAEGGDE
LGSSTGAVMDLLGALISYSEVIALLSADNNNLVSRVYAFLRHPIASVRLSVANILLAFSR
LSSIPRRWSSDGYFSFLFQNLVLEERQDVRDVSFQAFETSLVEASDMPEGVGVVLGGDVE
DWYSIIMTPIGVALDANLFRRPTKATGQTHNVDKAMMAGDMSLISMDTALQTRIAGAKAL
ALLRRYKLTEINDIKLLRQFLGSASSHQTFLASVIIQEWALDTESRVSDPFSFSLGTSNP
DVESLSTLLIDRIGSPAPSTYHEMAMVLQRIYSECSALLTAFSVEGKLSKDKVPSLPKRI
DPLSNTPDVFSIESAHHAVTTQFDILAGKLSKNAIKNALPSLQDRRNKVMGSVGYFSIMK
EKYDVQVMAGIAGALVALKIMPPKFGPVIKNLMDGVKKEENEILQKRDAFWVAAFIQYTT
SPFFTGRINPSDKVVKNLFTFLCLDTSVTPVFSPTAQGATEGIITLLEERTAAAAANARK
KDIVEESEEQMASRMTRRGALETFKAMAKRFGSNLFEKVPKFWEGVSGALLANFADGVNM
EQVDQNLTANVQAGQDLIDALTSLRLIAPELDPVLYYKLHGLFSPIITALQSSFSVVRNA
AAQCLAAMCDVMTDEGMKRVVDDVVPLVGDAKKAYSRQGAVEAIHRIIKVLDLKALPYVL
FLIVPILGRMSDPDEHVRLLSTSTFASLVKMVPLEAGIPDPPGFSADLLAKRDEERKFLM
QLLDGSKAEQYQIPVEIKAELRQYQKDGVSWLAFLAKYQLHGILCDDMGLGKSLQSICII
ASKHHERAERHKATQSIDSAHLPSLIVCPPTLTGHWYHEILKFAPHLRAVQYVGSTFERA
TLRRSLSSYDVVISSYECVRSDISELSKFSFLYCVLDEGHIIKNTKTKLAVAVKQIKAQH
RLLLSGTPIQNNVLELWSLFDFLMPGFLGNERTFNEKFSKPILADREGKATPKEREAAAN
ALEALHKQVLPFLLRRLKEDVLNDLPPKIIQDYYCELSPVQQQLYEEFSRSKAAEEAGME
IETSASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKEIQKKIGGGPELHDLSHAPKM
EALKQLLQDCGIGLPVDKLADDVTTHRVLIFCQLRPMLDIIEKDLFGTHMPTVSYMRLDG
STDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLTGADTVIFVDHDWNPMKDLQAMDR
AHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLNIASSVVTQQNAGLGSMNTGEVLDLFK
VSAEGEPVKTKSAGTGAVSMSKMLEELDELPPEDEYAELSLSNFLSKV |
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| NT seq |
5547 nt +upstreamnt +downstreamnt
atgtcctttagacaagataaactcatccttcttctcgacagtggatcttcacagcaaata
aggcaaactgcagcgaagcagattgctcgtatagctcgtacttctttcgatgccgccaca
tcaaaacctgatgcgaaacctcacgtcgatggtgatagttctataacagtccatagcagc
ggtgcggagcaagatgcgtggaacgatactctagagactatcagtaaaatactcgcgctt
ttcaagtcaaagtcatcagaaacacgacatgctgcggctcatgccattgggttactcgct
aaaagcatgcccgagtacatcgagatagcttcgatgagccgggcatttcttacttcacaa
ccgacagatctgccatctaccctcaagcatggccagatgctattggcgtccgcgggtaga
gagtacgctgctaaaccgttaccgggagacaaagccaaacgccggaaagctatgatggca
tctgttggcctaggtgatgctgtcggatggggtgaagataccgataaggtacttgatgat
gacgacgatgatatggaggatgtgaggaagactgcgcccccgagtagagagccctcggtg
cccccaccagatgttttcgaggggctgagtgcgaggcaaataacgatgcttaagcggaag
aagggcaccaacattatggaggaagccaacaagatgcgtcggctcaacgaaaaagctgtc
ggcaatggaagttcctcagcggcgccttctcgtgccaattctcctccccttcccgaatca
tcagcgacacctgatttgaaggccgaggtcatcacgatcgatcccggagcaaaagtcaga
gcagctgaagctggcggacaaatagatcctgctctcgataccgagggcaacccattggca
tcttccaaaactcttacaatcacttctggacaatccccatggactaccgttcttcttgaa
gtcattcctgacctacacgatacgacttggcagactcgtcatggctctgcattggtcatt
atggagatactccgttctcttggtacatcttacgctaatgcccatccagagctctacgtc
gccttatcccgtcagctactctcgctccttgttttggaccgtttcggtgactttgtgggc
gacactgtcattgctccagtacgtgaaactgcagctcagacactaggtgtcgtgctcaag
tacatttcaacccccggtgtcaaggaaatccaccagactcttatgggcatggtgagacaa
ccttgggccaagagagggaaggaggccgagaactcacaaaaggccgataaattcgcttgg
gaggtcagacatgccggattgttaggcttgaagtatgaagtggctgtgagaggagacttg
ttgtcgactaaaatggaagaggatgtcaagcccgacgtagagatgggggatttcaacctt
ttggatgatgtagtcaacgcggctatcttggcattgggagacgccgatgatgatgtgcga
acggttgctgcttccgccttaacacccattgcagagacccttgccagtcagttgcctact
gaagagttggccaagcttttgcagtcgctatgggattgtctagctgagggtggggatgag
cttggtagcagtacaggtgcagtcatggaccttctgggtgcccttatctcctactctgag
gtaatcgccctcctttctgccgacaacaacaacctagtctctcgtgtctacgccttcctt
cgtcatcctatcgcttccgtgcgtttatcggttgccaacattcttcttgctttttcacgc
ctttcttcaataccgcgacggtggtcttctgacggttacttctcatttttgttccagaat
cttgttttggaagaacgccaggacgtgagagatgtttctttccaagctttcgagacgtct
ctcgtcgaggcttccgacatgcctgagggcgttggtgttgtcctcggaggcgatgttgaa
gactggtactccatcatcatgactcccattggcgttgctctggatgccaatctcttcaga
aggccgacaaaagcaactgggcagacacacaatgtggacaaggcgatgatggcgggagat
atgtcacttatctcgatggatacggcattgcagacgagaatagctggcgcgaaagcttta
gcgctgttgagacgatacaagttgacagaaatcaacgacataaagctcttgcggcaattt
cttggttcagcaagttcccatcagacattcttggcttcagttatcattcaggaatgggct
cttgatactgaatctcgagtatccgatccattctcgtttagtctcggcacttccaacccg
gacgtcgaatccttatcaacgcttctcatcgaccgtatcggaagtcctgccccttcgacg
taccacgagatggcaatggtcctgcaaagaatctactccgaatgcagcgctctgctcact
gcgttcagtgtagaaggcaagctttctaaggacaaggttccctccttgcccaagcgtatt
gatcctctcagcaacactccagatgtcttctccattgagtctgctcaccacgctgtcact
acccagttcgacatcttagcaggcaagctatccaagaacgccattaaaaacgcattgccc
tctcttcaagataggagaaataaggtgatgggttctgtcggatacttctccatcatgaag
gagaagtacgacgtacaagtcatggcaggtattgcaggtgcgttggtggcacttaagata
atgccacccaaatttggaccagttattaagaacttgatggacggcgtgaagaaggaagaa
aatgagatccttcagaagagggatgccttctgggtagccgctttcatccaatatacaaca
tcacctttctttactggtcgaattaatccctccgacaaggttgtcaaaaatctctttacc
ttcctttgcctcgacacttctgtcactccggtgttctcaccgaccgctcaaggcgccacg
gaaggcattatcacacttctcgaggagagaacagcggcagcagctgctaatgctaggaag
aaggacatcgtggaagagagtgaggagcagatggcgagtcgcatgaccagaaggggtgct
ttggagacatttaaggccatggcgaagaggtttggctcgaacttgtttgagaaggtccct
aaattttgggagggtgttagcggtgcgctattggccaacttcgccgatggggtgaacatg
gaacaagttgaccaaaatttgacagccaacgttcaagccggtcaggatttgattgacgct
ctgacttctctccgtttaatcgctcctgagcttgaccctgttctttactacaaactgcac
ggtcttttctcacccataatcactgccctacagagctcgttttcagttgtccggaatgcg
gcggctcagtgcctcgctgctatgtgtgacgtgatgacagacgagggcatgaagagagtt
gtagatgacgtggtacccctggtgggtgatgccaaaaaggcctattctcgacagggtgct
gtagaagccattcaccgtattatcaaggttcttgatctcaaagctcttccttatgtcctt
ttcctcatcgtccccatcctggggcgtatgtccgatcccgatgagcatgtccgtctgcta
tcaaccagcacttttgcctcgctcgtcaagatggttcctttagaagctggtattcctgat
cctcctggcttttctgcggaccttctagcgaagagagatgaggagcgcaagttcctcatg
cagttgctagatggcagcaaggctgagcagtaccagatcccggtggagatcaaggctgaa
ttacgacaatatcaaaaagatggtgtcagctggttggcgttcttggcaaagtatcaactg
catggcattctctgtgacgatatgggtctcggtaagagtttgcagagtatttgtataatt
gcgagcaagcaccacgagcgtgccgagcgccacaaagctacccaatcaattgattcggct
catcttccgtctcttattgtctgtcctcccacgctcactggtcactggtatcacgaaatc
ctcaaattcgctcctcacctccgcgcggtgcaatatgttggttccacttttgaacgtgct
acccttcgtcgatccctttcttcttatgatgttgtaatttcctcgtatgagtgcgttcgt
tctgacatctctgaactctccaaatttagcttcctctactgcgttttggatgaagggcat
atcatcaaaaacaccaagaccaagctagctgtggctgtgaagcaaatcaaagctcagcac
agattattgctttctggtactcctattcaaaacaatgtgcttgagctttggagtctgttt
gatttcttgatgccgggattcctcggtaatgagagaacatttaatgagaaattctcgaag
ccgatcttggctgaccgagagggtaaggccactccgaaagagcgtgaagcagccgcaaat
gcccttgaggctctgcataaacaggttcttcccttccttcttcgtcgactcaaagaagat
gtcttgaacgaccttccgccaaagatcatccaagattactattgcgagctttctcccgta
caacaacagctttacgaagagttctctcgctccaaagcggctgaagaagccggtatggag
attgagacttcggcatcgaaagaaggtcagggccacgttttccagagtttgcagtatctc
agaaagttgtgtaaccatcctgcattggtactggacggcgaaccgcaaagatttaaggaa
atacagaagaagattggtggcgggccagaattacacgatttatcacatgcaccaaagatg
gaggctttgaagcaactgttgcaagactgtggtatcggtcttccggtcgacaagcttgct
gacgatgtcaccactcatcgagtccttatcttctgtcaacttcgtcccatgctcgacatc
attgagaaagatctttttggtacccatatgcccacagtatcttatatgcgtcttgatggc
tccactgatcctcggaagcgacatgccatcgttcagacgttcaatgcggaccctagaatt
gatgttttgctgttgacgacgagtgttggaggtttgggtctgaacttgacgggtgccgac
accgtcatctttgtggaccacgattggaacccgatgaaggatttgcaggcgatggatagg
gcgcataggctgggtcagaggaaggttgtgaatgtgtataggttaattactcgtggaaca
ttggaagagaagattatgggtctacaacggttcaagctgaacattgcttcatccgtcgta
actcaacaaaacgccggtctcggatctatgaacacaggagaagtgctcgacttgttcaaa
gtcagtgccgaaggcgaaccagtaaagacgaaatctgctgggacgggcgcggtgtctatg
agcaaaatgttggaagagttggatgagcttccgccagaggatgagtacgcagagttgtca
ttgtcaaatttcctcagcaaagtataa |
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