Cryptococcus deneoformans JEC21: CNF00100
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Entry
CNF00100 CDS
T00243
Name
(RefSeq) 3' tRNA processing endoribonuclease, putative
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cne03016
]
CNF00100
Enzymes [BR:
cne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CNF00100
Transfer RNA biogenesis [BR:
cne03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CNF00100
Prokaryotic type
CNF00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
3258073
NCBI-ProteinID:
XP_024513069
UniProt:
Q5KFZ1
LinkDB
All DBs
Position
6:complement(join(26400..27087,27163..27480,27687..27946,28044..28712,28769..29630,29686..29788,29840..30065))
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AA seq
1041 aa
AA seq
DB search
MASAETYQPNWAVRAVTTPTKDTDLCLYVSFDNVRFLFGCGEGTQRAFAQKKIGFSRLGG
VFIGSGELKGRGGLPGVLMSASDAGLSKIDVVGPPDISQYLATLRSSVIRENLTVNVIPY
PRDVTPGTPVKLYESRNITVHGVALIPTLDPFSATETNMVYPPYDPYSATFNPSHLSPAD
LQKWCDHIVRDMFQNNAQARLSKRAPSATPSPSTSPRLGSPIGSSKRPRTNNVFLAPDGT
INAARPDPRAPLPLPSDSDVETQMLYICQAPDVRGKFDVAKANTLGVPNGPLRGKLTRGE
SIEVPDPNVDGGTRVVMPEDCLVGGGKGGTLVIVNCTEKTLQTLLDGDALHKWQKETPTG
EREGEGGIDVMVHRVPRSVWGDERYQAWMQSFGEKTKHLIANTTPAIDHTVFNSAAWNTL
HLSLIEPTIFHPPFLRHASTSFPSFESNLPSNVTFIHPNDFVKMYPPSPLETFPWHEKDL
PFTVTENQADDAREKVKKEKKDYDVVCEKARSIVRQLDMEKAKAKETADEDEQSDDIVVT
TLGTGSAIPSKYRNVSSTHLAIPSLGGILLDAGEGTLGQLKRRFGEGLKSILEELKMVFV
SHMHADHHLGMNAVLEERFRLGINTPLYIIAPYLIALNLQETATWQAVGAEKGLKNVRFL
CVERLGERMSVDVTEKDSSQKVEWRQMEGGGKRRWPFVPLHGFSESVSKIQRLYLRQLFA
DLGLTAIYAPSVPHRGRAYGLVLEGAPTGKDGLKGKGWKIVYSGDTKPSQKLVEAGKGAT
LLIHEATLEDDKPEVAAVKGHSTFSQAIDVGKEMRAKYILLNHFSQRYPKLPKLPMPTSV
VPVVETPPTESINAEPNAIFGENATFSASSTSLQVSTEPIVSISFDFMSLRLGDMWKMPY
YMEGLSMLFAEPEDGEDVVNAVQTTEGTGVDGKEGNEKGGNQGKGDGKEKTVANVSWGGN
NASPVVAKPASKSKRSLKKEAARAVKAKAEEERAAASVSGIMVGGIQKEEKKEKRGGSPG
LEGPDRKRRSTGIEESGVEEA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgcagagacttatcagccgaattgggctgttcgagcagtaaccacaccaaca
aaagacaccgacctctgtctatatgtctctttcgataacgttcgctttttgtttggatgc
ggagaaggaacacaaagagcatttgcacagaagaaaattggcttctcgagactggggggt
gtgtttattggaagtggtgagttgaaaggaagaggcgggttgcctggtgttttgatgtct
gcatcagatgcaggtctttcaaagatagatgttgttggccctccggacatatctcagtat
ttagcgactttacgatcatccgtcatacgcgaaaatttgacggttaacgtcattccatac
ccaagggacgttactcctggtacaccggtgaagctttatgagtcgaggaatataaccgtg
cacggtgttgccctcattcctacgttagacccgttttcagccactgagaccaatatggtc
tatcctccctacgatccctattctgccacattcaatcccagtcacttgtcgcccgctgat
ctgcaaaaatggtgtgatcatattgtccgggatatgtttcaaaataatgcacaggctcgt
ctttcaaaacgagcgccttctgctactccttcaccttcgacatcccctcgattaggctct
ccgattggctcgtccaagaggccgcgaacaaacaatgtctttctagcgccggatggcacc
ataaacgctgctcgtcctgatccccgagctcctctgcccttaccctccgattccgacgtc
gagacacaaatgttgtatatttgccaagccccagatgttcggggtaaattcgatgtcgcg
aaagcgaacactcttggagtacctaatggccctttgagagggaagttgacaaggggtgaa
tcgatcgaagtgccggatccaaatgtggatggcgggacaagggtagtaatgcctgaggat
tgtttggttggaggaggaaaaggagggacccttgtcattgtaaattgtacagaaaagaca
ttgcaaacgttacttgatggtgacgctttgcataaatggcagaaggagacgccaactggg
gaaagagaaggtgagggagggattgatgtgatggtacacagagtgccaagaagtgtttgg
ggagacgaacgataccaggcttggatgcaatcttttggagagaagacgaaacatctaata
gcgaatacaactcctgctatcgatcataccgtattcaactctgccgcatggaacaccctc
cacctttctctaatcgagcctacaatcttccacccaccattccttcgccatgcttctact
tcatttcccagctttgaatccaatttgccctccaacgtcaccttcattcatccgaatgac
tttgtcaagatgtatcctccttccccactagagacattcccgtggcatgagaaggattta
cctttcactgtcactgaaaatcaagcggacgatgcaagggagaaagtaaagaaagagaaa
aaagattacgatgtagtgtgtgagaaggctaggagcatcgtccggcaactcgacatggaa
aaggcgaaggcaaaagagacggctgatgaggatgaacagagtgatgacatcgtagttaca
actcttggcacaggctcagccatcccttctaaataccgcaacgtctcctcaacacatctg
gccataccatccctcggtggtatactcctcgacgccggggaaggtactttgggacagctg
aaaagaaggtttggcgaggggttgaaaagtatcttagaagaactgaagatggtatttgtg
agtcatatgcacgccgaccatcatttgggaatgaacgccgtactagaagagagattcaga
ctcggcatcaatacacctctttacatcatcgctccttatttgattgctcttaacttacaa
gaaacggccacttggcaagccgtgggggcagagaaaggactgaagaatgttaggtttttg
tgtgtagaaagattaggtgagaggatgtcagtggatgtcacggaaaaggatagttctcag
aaggtcgagtggaggcagatggaagggggcgggaagagaagatggccatttgttccttta
catggcttctccgagtctgtctccaagattcagaggctttacctccgccaactattcgct
gacctgggtctcaccgccatctatgcgccctccgtacctcaccgtggacgagcttacggt
ctcgtcctcgaaggcgctcctactggcaaagacgggttgaaggggaaaggatggaaaata
gtctactctggcgatactaaaccctcacaaaaacttgtcgaagctggcaagggcgcgaca
ctattgatacacgaagcaacactcgaggatgataagccagaagtggcggcggtcaagggg
catagtacattctcgcaggcgatcgacgttgggaaggaaatgagagccaagtatattctg
ctcaatcacttctctcaacgatatcctaaactgccaaagttgcccatgccgacatctgtc
gtgcctgtcgtcgaaactccccccaccgagtccattaacgctgaaccaaatgccattttc
ggtgagaatgcgactttctctgcctcctcgaccagcttgcaagtttcaaccgaacctatt
gtatcaatctcattcgacttcatgtcccttcgcctaggtgacatgtggaaaatgccctac
tacatggaaggtttgtcaatgttgttcgccgagccggaagatggagaagatgtcgtgaac
gcagttcagacgactgaaggcacaggcgtagatggaaaagagggaaatgagaaaggagga
aatcagggtaaaggagacgggaaagagaagacggttgccaatgtgagttggggggggaat
aatgctagtcctgtggtagcgaagcctgcttcaaagtcaaaacggtccctcaaaaaagaa
gctgcaagagcggtcaaggcgaaagcggaggaagagcgagccgctgcttctgtgagtgga
ataatggttggcgggatacagaaagaggagaagaaggagaagagagggggtagccccggg
ttggaagggcctgatcgcaagagaagatcgacgggcattgaggaaagtggtgtcgaggaa
gcatga
DBGET
integrated database retrieval system
