KEGG   Cryptococcus neoformans var. neoformans JEC21: CNF00390
Entry
CNF00390          CDS       T00243                                 
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit, putative
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNF00390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNF00390
Enzymes [BR:cne01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CNF00390
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CNF00390
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Pox_A9
Other DBs
NCBI-GeneID: 3258319
NCBI-ProteinID: XP_571468
UniProt: Q5KFV9
LinkDB
Position
6:join(144721..144788,144847..144988,145053..145202,145253..145615,145664..145779,145829..145928,145979..146053,146101..146492,146543..146691,146742..147587,147637..148064,148118..148460,148514..148869,148919..149005,149059..149127,149177..149680,149740..149952)
AA seq 1466 aa
MDTWAVVDQNEKHYVSSDVPRRIKHIQFQPFTPKDIVRISEVQVSIAELYQNNEDGTRTT
ALQGPLDARMGPNEKGKKCATCGEDTQKCVGHYGYIKLVLPVFHIGYFRPTINMLSCICK
TCARVLLPETERASFLKRFRRPNLESLQRQSAAKAVLAACKKQNICTYCGAPNGIVKKSG
PLRISHEPYRAAKMASMKDEWMATFKNAVAENQAVATHLAKAVDDLNPLKVLNLFERITA
EDCELLSLHPEVGRPEDYIWQYISVPPPCIRPSVASEAGNNEDDLTAKLAEIVNYNNTLA
LMMDLGRGIEMISSNWEVLGQAVALYINSQAPGMQTIGSKPIRGFVQRLKGKQGRFRGNL
SGKRVDFSGRTVIGPDPNLRIDEVAVPEKVAVKLSYPERVTDYNLQLMRQAIINGSKLHP
GANVLERKHENGSTVRISLNVMKDLEARKRYARELQIGDIVHRHVRDGDIVLFNRQPSLH
KLSIMCHRVRVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARTEALELMSVKKNL
VTPRNGEPIIAAIQDFITAAYLLSRRDRFYDRQQFTQIVSYLDDANLKIEMPPPTIWKPV
RLWTGKQIFNLLMRPNKESKVLVNLEAKCRTLVDPAKEDRFPPDMSPNDGYLVIQNSEIM
CGVFDKNTVGDGKKNSVFGVILRDYGPEEAAQAMNRLAKIAARWLANIGFSLGINDVIPG
PILHASKDARVEKAYDECDVFIDLAKKGKLENAPGCDQEATLESKISKTLSDVREAVGKI
CMQELSRHNAPLIMATCGSKGSVINVAQMVACVGQQIIGGSRVRNGFQDRSLPHFRKKSK
NPPSKGFVRNSFFSGLTPPEFLFHAMSGREGLVDTAVKTAETGYMARRLMKALEDLCTHY
DLSVRNSVGGIVQFQYGDDMLDPACLEGDATPVEYVRSWTHACRTAGNQGRALYPYEVRR
IAARIYPESFVPPNFSPSLPKTKSRRRKEPTPPPPVVAPTLPKEWEGCHHKFRENTYKFV
VDKIVKQMVDQRLARGLPDADDEEMAEEYEALLNSDDPAVQRVLENANKVTEAQLSSFLE
NCRIRYLRAKIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA
AKVISTPIIAAELAIPESETAARIVKGRIEKTVLGDIAAVIEESWTNANAYIEVHIDMDA
VRRLQLEISLESIKWALVRANKLKIPEGSIHISQKTSRIRIWIDESDKDKGVGIYERLKF
LKRAIPSVQVKGLPAIERGVVTKDEKNEKIHRLLVTGYGLSEVMGTEGVDGLKTKTNHVM
ETQQVLGIEAARSTIYNEIQTTMKSHGMSIDPRHVMLLGDVMTYKGEVLGITRFGVQKMK
DSVLMLASFEKTTDHLFDASLYSKKDEIQGVSECIIMGTPAPGCGTSLASIVTPAPPLPS
KKPLLFEAAYKAGQHRMSKGMMVAAY
NT seq 4401 nt   +upstreamnt  +downstreamnt
atggacacctgggcggtggtcgaccagaatgagaagcactacgtctcttcagacgttcct
cgtagaataaaacatattcagtttcaaccattcacacccaaggatattgtccgaatttca
gaagtccaagttagcattgccgagctgtatcagaataatgaggatggaacaagaactacg
gctcttcaaggacctttggatgcccgtatgggacccaacgagaagggaaagaagtgtgcg
acttgtggcgaagacactcagaaatgtgttgggcattatggttacatcaagcttgttttg
cctgtattccatatcggatactttaggcccaccatcaatatgctctcttgtatatgtaaa
acttgtgctcgtgtccttctaccagagacagaacgcgcttccttccttaaacgttttcgt
cgccctaacctcgaatctcttcaacgtcaatctgctgccaaagctgtcctcgcagcctgt
aagaagcaaaatatatgtacgtactgcggtgcccccaacggtatcgtcaagaagtccggt
ccccttaggatttcgcacgaaccctaccgagcggccaagatggcaagtatgaaggatgag
tggatggcgaccttcaaaaatgcggtggcggagaatcaggcggttgcaacgcatttagcc
aaggctgtggatgatttgaatccgttaaaggtgttaaacttgttcgaaagaattactgcg
gaggattgcgagttactatcattacatcctgaagttggtagacctgaagattacatttgg
caatacatctctgtaccacctccttgtattcgaccatctgttgcttcagaggctggaaac
aacgaagatgacctgacggccaagctcgccgagattgtcaactataacaataccctggca
ctcatgatggacttgggtaggggtattgagatgatttcgtccaactgggaagtcttgggt
caagcagttgcgctgtatattaactctcaagcacctggtatgcaaaccattggcagtaag
cccatccgaggtttcgtacaacgcctcaagggtaaacaaggtcgattccgaggtaatctt
tccggtaaacgtgtcgacttttccggacgaactgtcattggtccagacccgaatctccgt
atcgacgaagtcgccgttccagaaaaggtcgccgtcaagctttcatatccagaaagagtg
acagattacaatcttcaacttatgcgacaagcgatcatcaacggttcaaagcttcatcct
ggtgcgaatgtgctggaaagaaaacatgagaatggatccaccgtgcggatctcgctgaat
gtcatgaaggatttggaagcgaggaaaagatatgcgagagagttacagattggagatatt
gtacaccgacatgtgagggatggagatattgtattgtttaaccgacagccgtctttgcac
aagctgtctatcatgtgtcatcgagtccgagtcaggccctggcggacgttccggttgaac
gaatgtgtctgtaacccttacaacgccgatttcgatggtgacgaaatgaatttacacgtt
ccgcaaactgaggaagctcgtacagaagctctcgaactcatgtcggtcaagaagaacctg
gttacaccgcgaaacggagaacccattattgctgctattcaggatttcatcacagccgcc
tacctgctctctcgacgagaccgattctacgatcgacaacagttcacgcagattgtttct
tacctcgatgatgccaacttgaagattgagatgcctcctccgactatctggaagcctgtc
agactctggactggtaaacaaattttcaaccttctcatgcgacccaataaggaatccaaa
gtactcgtcaatctcgaagctaagtgccgaacgctcgtcgaccccgccaaggaagaccgt
tttcctcccgacatgtctcccaatgacggataccttgtcatccagaacagtgagatcatg
tgtggtgtcttcgacaaaaacacggttggtgacggaaaaaagaactcggtgttcggtgtc
attctgagggattacggacctgaggaagcggcgcaggcgatgaacagattagccaagatt
gcagctaggtggttagcaaacatcggtttctctctcggtatcaacgatgttatccccggt
cctatcctccatgcgtctaaggatgcccgtgtcgagaaagcttatgatgaatgtgacgtt
ttcatcgatcttgctaagaagggcaaattggagaatgcgcccggttgtgaccaagaagcc
actctggagtcaaagatctcaaagacactttccgacgtccgagaagctgtcggtaagatt
tgtatgcaggagttgagtagacacaatgcccctcttatcatggccacctgtggttctaaa
ggttccgtcattaacgtcgcccaaatggttgcctgtgtcggtcaacagatcattggtggt
tctcgtgttcgaaacggtttccaggatcggtcgcttcctcacttccgcaaaaagtccaag
aaccctccctccaaggggttcgtccgcaattctttcttctccggcctcactcctcccgaa
ttccttttccacgccatgtctggtcgagaaggtctggtcgacactgcagtcaagactgcc
gaaaccggttatatggctcgtcgattgatgaaggcgcttgaggacttgtgtacacactat
gatctgagtgttaggaattcggttggaggtatcgtgcagttccaatacggtgacgatatg
cttgatccggcttgtttggaaggtgatgctacgcctgtggagtacgttcgaagttggacg
catgcttgtcgaacggccggtaaccaaggacgagctctgtatccctatgaagttcgccga
atcgctgctcgaatataccccgagtcttttgttcctcccaacttctctccatccctgcct
aagaccaagagtcggcgtcgcaaggaacccactccgccgccgcctgtcgttgcacctact
ctccccaaggagtgggaaggttgtcaccacaagttcagagagaacacctacaagtttgtt
gtggataagatcgttaagcaaatggttgaccagaggctggcgaggggtttaccggatgcg
gatgatgaggaaatggcggaggagtacgaggcattgttgaactcggatgatcctgctgtt
cagcgtgtactggagaatgccaacaaggttaccgaagctcaactgagttctttcctcgaa
aactgtcgtatccgctaccttcgagccaagatcgaacccggatctactgtcggtgccgtc
ggtgctcagtctattggtgaacctggtacacaaatgacgttgaagactttccattttgct
ggtgtcgcttcgatgaacgtcacgttgggtgtaccccgtatcaaggaaattatcaatgct
gcaaaggttattagtacgccgattattgcggctgagttggccattccagaaagtgaaacg
gcggcgaggattgtgaaggggcgaatagagaagacagttttgggtgatatcgcggcagtg
attgaggagagttggacaaacgcaaacgcctacattgaggttcacattgatatggatgct
gtgcgacgactacagctcgagatttcactggagtccatcaaatgggcattggttagggcc
aacaagctcaagatccctgagggctccattcacatttcacaaaagacctcacgtatccgt
atttggattgacgaatcagacaaggataagggtgttggtatctacgaacgtctgaaattc
ctcaagcgcgccatcccctccgttcaggtcaagggtctccctgctattgaacgtggtgtc
gttaccaaggacgagaagaacgagaagatccatcgattgcttgtcactggttacggtctg
tcagaggtcatgggtaccgaaggtgtcgacggtctcaagactaagaccaaccacgtcatg
gagactcaacaggttctcggtatcgaagccgccaggtctactatttacaatgaaatccag
acgaccatgaaatcgcacggtatgtcaatcgacccgcgacatgtcatgttgttgggcgat
gtcatgacctataagggtgaggtgttgggtatcacgaggtttggtgtgcagaaaatgaaa
gactcggttctgatgttggcgagtttcgagaagacgacagatcacttgtttgacgcttct
ttgtactcaaagaaggacgaaattcaaggtgtatcggaatgtatcatcatgggaactcct
gctcctggttgtggtacctctctcgcgtctatcgtcactcccgctccaccactaccctcc
aagaagcccttgctgtttgaggcggcgtacaaggcgggccagcatagaatgtcgaagggg
atgatggtagcggcgtactag

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