KEGG   Cryptococcus deneoformans JEC21: CNF01830
Entry
CNF01830          CDS       T00243                                 
Name
(RefSeq) nuclear mRNA splicing, via spliceosome-related protein, putative
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
cne  Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cne03041]
    CNF01830
Spliceosome [BR:cne03041]
 Complex C
  Other components
   Complex C specific factors
    CNF01830
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Vps41 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N PQQ_3 Beta-prop_WDR19_1st WDR54
Other DBs
NCBI-GeneID: 3258130
NCBI-ProteinID: XP_571642
UniProt: Q5KFG5
LinkDB
Position
6:join(538673..538761,538813..538977,539031..539185,539247..539680,539729..539857)
AA seq 323 aa
MSVAKVAPSKGPSDEKAPGILSYPTKLLQTLDAHQAPVNVVKYNNGAKYLLSGSADRTIR
LWNPALGKEIKCYRGHAQEVLALDIAQDNAKFASSGGDKAVFLWDVASGAVTRRLQGHFG
KINAVRFSQEAQVLASAGFDAKVMLWDMRASSRDPIQTLKEATSTITSLILPTSPQIITG
SSDGYIRTYDLRFGLLTDDLVGWPITSLKLSPTAPEESVLVGTNDGKVRIFDRKDGGCLQ
TFQGHKVGEQTARWGMDWGYGDGLALAGDEEGKLWAWNVLDAKPIDKDPNPIHKRTITSI
ITHPKGKEMITASNDGTIKVWSR
NT seq 972 nt   +upstreamnt  +downstreamnt
atgagcgtcgcaaaagtagctccctccaaaggcccgtcagacgaaaaagcgccgggcata
ctctcttatcctacaaagctacttcagaccctcgacgctcaccaggctccggtcaacgtc
gtaaagtacaataatggagccaagtatctcttgtctgggtcagcagaccgaacaattcga
ctgtggaaccctgcactaggcaaggaaatcaagtgttaccgaggacacgcccaggaagtc
ctcgcattggatattgcccaggataacgccaagtttgcatcctctggaggagacaaggcg
gtttttctgtgggacgtcgcttcaggagccgtaactcgtcggctgcaaggtcactttggg
aaaatcaacgctgtgcgtttcagtcaagaagcccaagtactggcaagtgcgggatttgac
gccaaagtaatgctctgggatatgcgtgcatcttcacgcgacccaatccaaacactgaag
gaagccacatccaccattacgtctcttatactgcccacgtccccccagataataactggc
tcatctgatgggtatattcgtacttacgatctgcggtttggtttactcacggatgacctc
gtcggatggccaatcacttccttgaagctatctcctacagctccggaggaaagtgttctg
gtcggaacaaatgatggaaaggtcaggatttttgatagaaaagatggaggttgtctgcag
acgttccaaggacacaaggtgggagaacaaactgcaagatggggaatggactggggatat
ggcgatggactcgctctggcaggtgacgaagaaggcaagttatgggcatggaacgtcctc
gatgcaaagccaattgacaaggacccaaatccaatacacaaacggacaatcacttcaata
atcactcatcccaaaggtaaagaaatgatcaccgcgtccaacgatgggaccatcaaagta
tggtctcgttga

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