Cryptococcus neoformans var. neoformans JEC21: CNF01950
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Entry
CNF01950 CDS
T00243
Name
(RefSeq) transcription initiation factor IIB, putative
KO
K03124
transcription initiation factor TFIIB
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNF01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNF01950
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CNF01950
Prokaryotic type
Archaeal type
TFB
CNF01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
3258410
NCBI-ProteinID:
XP_571527
UniProt:
Q5KFF2
LinkDB
All DBs
Position
6:complement(join(574829..574930,574988..575039,575093..575850,575900..575904,575969..576026,576078..576185,576244..576276))
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AA seq
371 aa
AA seq
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MVAVAGPKAPGPRFGQSVVPNLNIKQICPNCRTDPPNIVEEYAKGDLVCADCGTILGDRI
VDTRSEWRTFAGDENGDDPSRVGDAGNPLLGSNHLDTMISHKDGRTGIARDLNRAQARAN
TLSNGIYGKSSVAQLSAVFSRIGEKCDAMQLPRGVRERAQHVYKIVDEARAIKGKNEPAV
IAACIVYACRDAKVHRTFQEVCKALKISKKELGQVFNHVKSVVQSSSAQGSMVSVHGSNN
AQESAEGLLGRFANYLDLGNAVFNVSKHIAGEAVAKSAIDGRSPVSIAAGVLYFTCVLLG
KSTTAKDISAMGGVSESTTKLITKMVASKLDDVIRPEWRTEYPDGYAALAQLGKVSESNK
NSRSGSLAAQS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgtcgctggaccaaaggctcctgggcccaggttcggtcagagtgtcgtgccc
aatcttaacatcaaacaaatctgtccgaactgtaggaccgatcctcccaatattgttgag
gagtatgccaagggtgatctagtttgtgccgactgtgggaccatcctaggtgaccgtatc
gtcgatacgaggagtgaatggcgaacatttgcgggagacgagaatggggacgatccctcg
cgtgtcggtgatgctggcaatcctcttctcggaagtaatcacctcgacacaatgatttct
cacaaggacggtcgaaccggtatcgctcgagatctcaaccgcgcacaagcacgagccaac
actctgtccaatggaatctatggtaaatcttctgtggcacaactatccgctgtcttctcc
cgtatcggagaaaagtgtgacgcgatgcagctccctcgcggtgtaagagaacgtgctcaa
cacgtttacaagattgtcgatgaggcgcgagcaatcaaggggaagaatgaacctgctgtc
attgctgcctgcattgtttacgcttgcagagatgccaaggttcatcgtaccttccaagaa
gtatgcaaagccctcaaaatcagtaagaaggagctcggacaggtcttcaaccacgtcaag
agtgttgttcagtcttccagtgctcagggttcgatggtgtctgtccacggatcaaacaat
gcgcaagaatctgctgaaggtttattgggtcgttttgcaaactatctggatctgggcaac
gccgtgttcaatgtgtctaagcatatcgcaggggaagccgttgcaaagagcgctatcgac
ggcaggagtcccgtgtcgatcgcggcaggtgtgttgtacttcacatgtgtactgttgggg
aagagtaccaccgccaaggatatttctgcaatgggaggagtgtcagagtcaaccacgaag
cttatcaccaagatggtagcaagcaaacttgacgatgtcattcgccctgaatggagaacc
gagtatccggacggctatgccgcgcttgcccagctgggcaaagttagcgaatctaataag
aactctcgaagtggcagtctcgccgcacagtcttga
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