KEGG   Cryptococcus neoformans var. neoformans JEC21: CNF02620
Entry
CNF02620          CDS       T00243                                 
Name
(RefSeq) Pol II transcription elongation factor, putative
  KO
K11373  elongator complex protein 1
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cne03016]
    CNF02620
Transfer RNA biogenesis [BR:cne03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    CNF02620
SSDB
Motif
Pfam: Beta-prop_ELP1_1st A-sol_ELP1 TPR_ELP1 Beta-prop_ELP1_2nd HB_ELP1 TPR_GEMI5 Beta-prop_WDR19_1st TPR_1
Other DBs
NCBI-GeneID: 3258134
NCBI-ProteinID: XP_024513037
UniProt: Q5KF87
LinkDB
Position
6:complement(join(751583..751848,751912..752033,752098..752236,752287..752574,752628..752765,752843..752906,752956..753177,753244..753377,753433..753665,753724..753882,753935..754385,754442..755020,755063..755197,755244..755789,755845..755917))
AA seq 1182 aa
MLVCMTRNFDVIHEEPLRSEDFGQDKFINVGWGSRSTQFHGSLGKSAARQPADPARPVAH
PTDHGLPVISFRGDAAFFAVSSLDPYPDGSGQARRQVRIYARDASSGFQPKLSATSESLP
GLEPALAWRPSGNLISTMVRYGYHGGGEGREGRWDVAMLERNGLRHGGFELREDKGDWED
GTVRGLGWNSDSEILAVWIERKERDVLQLWSMKNYHYYLKQELYSHDTQKPRFRGFKWHP
EDPLSLYIICQDSIQHRTFTWDTFAARLPMPHDTASVAVIDGTRLLLTPFRTQNTPPPMS
SYHLALPSTPVHACLSSWEDTAAAVFANGHVMVWKLNTRLPSPAPGSKLKRGGQVAEPVI
VLEKKVDGKRVIRNLALGPRGRVAVLSLAVDADGPAEQSGRVNVFGGGEGEQDEEFEVES
GVESILWTDQGNVLVLNGQKRLYSLASEEPIDLTLPSQPTSVLLSGHLLFTLSPTSKLHM
TALTPFAAHPTSLSLSQQPVTSFTLTSSFLIYTTTAHFAHFAPLVTLERLANGDDGAGGS
GSEMKWEERRVERGAKIVVASESEMSLVLQATRGNLETVYPRPMVLQVVKRDVLAGAYRA
AFLTCRKHRLDLNLLYDLDPEKFMANLETFVENVHEVDYLNLFISSLNSEDSAKAVYGDQ
ARDQARDTPPTIPAAKDKVNTICDSLRILLEARGLETYVESILTTHVCKIPADYESGLRV
LLQLQADHPEIVEDAIKYIIFLSDVNKLYDVALGMYNFQLVLMIAQYSQKDPKEYLPFLR
ELRALGKWDQRFKIDDHLERRESALANLKQAGPERFEDAASYLAKYELYDTAFKLYNDDQ
EKLTVIRDLYGDYLYDRREYTDSALSYLIANKPQKALKAYERAHAWRELFALAKKEGLSK
QSLDEMIERVTDYLGSRGRHLEASQIFIEYSSDVDSAVDTCCRGAEFSEAYRLTSIHDRS
DLVEAMIHPGLEEAHEALIEVFEEMDGQLDKETRRLKELNEIREKDYDAFYIVEREIDIE
GVDVATNATTVASAFTRYTVAPSTMFSQTTRMTGQTAKSKRGKKRATGRRGTVDEWEYLV
MSIGRLLARVDEKSAEALILLRHLLLASSDHVALAQSLQNTIISFRTKLSNALDEAWQDR
DAVLKEVVESGGSGLEGALEKSLGEIKPQVGEWKGMGLLLSN
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgctcgtctgcatgaccaggaatttcgatgtcatccacgaagagccgctgcgatcagaa
gactttggacaggacaaattcatcaacgtcggctggggatccaggtcgacccagttccac
ggctctctcggcaagtccgccgcccgccagcccgccgaccccgcccgcccagtcgcccac
ccgaccgaccatggtctccccgtcatctcgttccgcggcgacgccgccttcttcgccgtc
tcgtcgctcgacccctacccggacgggtccggccaggcaaggcgccaggtcaggatatac
gcccgcgacgcctcgtcaggtttccagcccaaactgtcagccacctcggaatccctgccc
ggcctggaacccgccctcgcatggcgaccgagcgggaacctcatctccaccatggtccgg
tacggctaccacggcggcggagaaggtcgggaaggcaggtgggatgtggccatgctggag
agaaacggattgcggcatggcggtttcgagctgagagaggacaagggagattgggaagac
gggacggtcaggggattggggtggaattctgattcagaaatactggccgtctggatcgag
cggaaggagagggatgtcttgcaactatggtccatgaaaaactaccactactatctcaag
caggaactctactctcacgatacgcaaaaacccaggttcagagggttcaaatggcacccg
gaagaccccctatctctctacatcatctgccaagactctatccagcaccgcacattcaca
tgggacacctttgccgcccgtctacccatgccgcacgataccgcctccgtcgccgtcatc
gacggcacccgtctcctcctcacccccttccgaacccaaaacacacccccgcccatgtcc
tcctaccacctcgccctgccctccacccctgtacacgcgtgtttatccagctgggaagac
acggccgcagcggtgttcgcaaacggccacgtaatggtatggaaactcaacacgcggctg
ccttcgcctgcacctggatcgaaattgaaaagaggcggccaagtcgcagagccggtgatt
gtccttgagaaaaaagtggacggaaaaagagtcatccgcaatctggcgctcggtccccgc
ggtcgagtcgcagtcctcagtctggcggtagacgcagacggtcccgccgagcaaagcggg
cgcgtgaatgtgtttggaggaggagaaggcgaacaggatgaagagtttgaagtggagagt
ggtgtcgagagcatcttgtggactgatcaaggcaatgtcctcgtgttgaacgggcaaaag
agactgtacagcttggcaagcgaagaaccgatcgatcttacacttccctcccaacccacc
tccgtcctcctctccggccacctcttattcactctttcaccaacatccaagctccacatg
accgctctcaccccatttgcggcccaccccacctccctctccctctcccaacaaccagtc
acctcgttcacgctcacgtcttctttcctcatctacaccactaccgctcactttgcgcac
tttgcgcctctggtaacattggaaagactcgccaatggagatgatggcgcgggcggcagc
ggcagcgagatgaagtgggaagagcgaagagtggaaagaggcgcaaaaatcgtcgtggcc
agtgagagcgaaatgagtttggtgctccaagcgactcgtggtaatctcgagacggtttac
cctagacccatggtcttgcaagtcgtcaaacgggatgttttggccggagcgtaccgtgca
gcattcctgacgtgcaggaaacatcgactggacctcaacctcctgtacgaccttgaccct
gaaaagttcatggccaacttggagacctttgtggaaaacgttcacgaggtggattacctc
aaccttttcatctcttctctcaactcggaagactcggccaaggctgtttatggtgaccaa
gctcgcgaccaagctcgcgatacacccccgaccatccccgccgccaaagacaaggtcaac
accatctgcgactcgctccgtatcctcctcgaagcccgcggtttggaaacgtacgtggag
agtatcctcaccacccatgtctgcaagattccggccgattacgaatcgggattgagagtc
cttttgcaattgcaagcggaccacccggagattgtagaggatgcaatcaagtacatcatc
ttcctttccgatgtgaacaagctctacgatgtagctttgggaatgtacaacttccagctc
gtcctcatgatcgctcaatattctcaaaaggatccgaaagagtaccttccctttttgcga
gaactccgcgctcttggtaaatgggatcaacgattcaagattgacgatcatctcgaaaga
cgagaaagtgcgttggccaacctcaagcaagctggtccagaaaggtttgaagatgcagca
tcgtatctcgccaagtatgagctgtatgataccgcatttaaattgtacaatgacgatcaa
gaaaaattgactgttatccgtgacctttacggagactacctgtacgaccgccgagagtat
acagattctgcgctttcatacctcatcgcgaacaagcctcaaaaagcactcaaggcgtac
gagcgtgcgcatgcctggcgagagttgtttgcgttggccaagaaggaaggtttatcaaag
cagtctttggatgagatgattgagcgtgtcacagactatctgggctcccgaggtcgacat
ttggaagcttcccagatattcatcgagtattcatccgatgttgatagcgctgtcgatact
tgctgccgcggcgccgaattctctgaagcctaccgcttgacatctatccatgaccgatcg
gatcttgtagaagccatgattcaccctgggttggaagaggcacatgaagcgctcatcgag
gtctttgaagagatggatggacagctggacaaggaaacaaggagattgaaggaattgaac
gagattcgggagaaagactatgacgcattctatatcgtggagagggagattgatattgaa
ggcgtggacgttgccaccaatgctactactgtcgcctccgcattcacacgatacaccgtt
gcgcctagcacaatgttttctcagacgactcgaatgaccggtcaaacggccaagtcaaag
aggggcaaaaagagggctacaggtcgaaggggtactgtggatgagtgggaatacttggtg
atgagtattgggcgattgctcgcacgcgtagatgaaaaaagcgccgaagccctcatactc
ttacgccaccttcttttggcctcctcggaccatgtcgctctcgcccagtctctccaaaac
accatcatctcgttccgaacaaagctttccaacgctttggatgaagcttggcaagataga
gatgctgtgctgaaagaggttgtagagagtggcggtagtggattggaaggtgcattggag
aaaagcttgggagagatcaagccacaggtgggagaatggaaaggaatgggtctgttattg
agcaattga

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