Cryptococcus neoformans var. neoformans JEC21: CNF02870
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Entry
CNF02870 CDS
T00243
Name
(RefSeq) expressed protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNF02870
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
CNF02870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med5
Motif
Other DBs
NCBI-GeneID:
3258206
NCBI-ProteinID:
XP_024513123
LinkDB
All DBs
Position
6:join(817172..817240,817291..817357,817409..818373,818440..818591,818646..818775,818840..818941,818989..819339,819393..819616,819673..819881,819932..820575)
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AA seq
970 aa
AA seq
DB search
MLSSPSIPQLIATAYAQALPPSRLLKTLQEVHLHNLSPSVQYDLIRAFLDHLLPVPPSIM
LAYLAHALSTSVITTQDFTIGLLFYMSGHEIPPIESLVSIVNVLMENPTCFEDGTILPSM
LSDPALVQSDTNGELSKYRDNNQTSTLSLLLPLLRVSATPFPPPTLTAFIARLLNCLSPF
PVPPLDVGLEAGQLLPSLTDEISIPLRNCLGGLMADATTNDPQQVEQVVFQQDSQLAQGD
SPSQVEMPTNSSLPLKATVAFLLEQAHRASQWDPSELALEMEHYQTPAPSYVRMLKAGQH
ICSNPEEFIVVLFEVSIERLISEDGRSLIAKAEGIRDWGWVTESLPNLLRWWRSQREEDG
FVGWQLPSVVAEPLTKAVQVFLPAMQSYSEKVLETYEVMVQSAEIEEESSGFTPPESWQL
VSLQEYLIGKLIEMELITRTEACKMIPTISVPQTVQGQSLLERMESESRAHVKPLVFIIT
YAFGAAKSFAYEIVNIIKSSPQVPPPENLFLHVSYQPSIFSALVTFISPLSLYTLMSDRL
LEAYSELDEFARSDDPQGYLTRFGEGVILLESFAREFNLDLPELLANGRRATGYGLLDAE
QKDCLNGWVKAIFGSDGIEDQILLATPPQTLCCLVPTLIQQAIAAVACNQIDLDTLHSGL
SYFSQPLLSWCLGGVIEWLCDEILRQGALSALHLVVLQALAMGHACPEQLLKVNDRALRK
LFNPLSGLDEVIGTSNFDMFAFKAKLESLGITTSHHYGPLNQPSVKSSIQSISSLPFATA
FWANPLLDSLWASAGTSNWMTVVLKNIFSQLDTFPVSPVGSACQRSGVYANFVPFLLMVD
IKGNEPLLSGLAAWLRNSTEDLIHYTRGSRVLAGIFTQCILLADLIWGRVMAKRVIKELV
VELHSVTTLGVRSGGQSEETTQLHSRKMKHRDGRRLTSEQRSMCEDIVKMLTYDDGLRAR
WGNHWVDLAV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctctccctcgatccctcagcttatagccacagcttatgcccaagcattgcct
ccttctcgcttactcaagactcttcaagaagtccatcttcataatcttagccccagcgtc
cagtatgatctcatacgtgcatttcttgaccatcttcttcccgttcctccgtccatcatg
cttgcctatcttgcccatgcactatcgacatccgtaataacgacacaggatttcacaatt
ggattgcttttctatatgtctggtcacgaaattccccctatagagtctcttgtttccatc
gtcaatgtcttgatggaaaatcccacttgttttgaagatggtaccatcttgccctctatg
ctttctgatccagctttggtacaaagcgacaccaacggtgaattatcaaaataccgtgac
aacaatcagacaagtacgctgtcccttcttctccctttactgcgtgtatcagctacgcca
ttccccccaccaacactcacggctttcattgcccgattattaaactgcctctcgcccttt
ccggtaccgccactcgatgtaggtctggaagcaggtcagttacttccttccctcacagac
gaaattagcatcccactccgaaactgcctgggagggctgatggccgatgcgaccacaaat
gacccgcaacaagttgaacaagtcgtatttcaacaggactcacaacttgcacaaggcgat
agcccttcccaagttgaaatgccaacaaattcctcacttccacttaaagctactgttgcg
ttcttattagaacaggctcatcgtgcatcccaatgggatccctctgagcttgccctcgaa
atggaacattatcaaacacctgcaccaagttatgtacgcatgctcaaagcaggccagcat
atctgttccaaccctgaagaattcattgtcgtcttattcgaagtatcgattgaaaggcta
atttccgaagacggccgaagcctcatagccaaggctgaaggaatacgagactggggttgg
gtaactgaatccttacctaatctcctaagatggtggcgatcccagagggaagaggatggc
ttcgtaggttggcaactgccgtctgtggtcgctgaacctttgaccaaagctgtacaagtg
tttcttccggccatgcaaagctattctgaaaaggtgttagagacgtacgaagtaatggtg
caatctgcggagatcgaggaggaatccagtggatttactccccctgagtcttggcaatta
gtgtcattgcaagagtatctcattgggaagttgattgagatggagctcatcactagaacc
gaagcctgtaagatgatcccgacgatatcagtaccacaaactgttcagggtcaatcttta
ttggaaaggatggaatcggaatctcgtgcccatgtcaaacctctcgtgttcatcataact
tacgctttcggcgccgcaaagtctttcgcatatgaaattgtcaatatcatcaaatcatcg
cctcaggtgcccccgcctgaaaatcttttccttcatgtatcgtatcagccctcaatattt
tcggccctggtcacgttcatatcacctttgtcgctgtatacgctaatgtcagatcggcta
ctggaagcttattctgaattggacgaattcgcccgatctgacgacccacagggctacctt
acgagatttggagagggggtcatcttgctcgaaagctttgctagagaattcaatttggat
cttccagaattgctcgcgaacgggagaagggcgactggatatggcttgttggacgcagag
cagaaggactgcttgaacggttgggtaaaggcaatcttcggctccgatggaatagaagat
caaatacttttggccacccccccgcaaacactttgctgcttagtacctactttgattcaa
caagctatcgcggcggtagcctgcaatcaaatagatcttgataccttacatagcgggctt
tcgtatttctctcaaccgttattaagctggtgcttgggtggagtgatcgaatggctctgt
gacgagattctaaggcagggagccctgagtgcgctccatctcgttgttcttcaagcacta
gcaatgggccatgcttgcccagaacagcttctgaaagtgaatgacagagctctcagaaaa
ctatttaatcctctaagtggtctagatgaggttataggaacctcaaattttgatatgttt
gcattcaaggctaagctagagtctctggggatcaccacctctcatcactatggaccgctg
aatcagccgtcagttaagtcaagtatccaaagcatcagcagtcttccatttgcaacagca
ttttgggcgaatcctctgcttgattccctatgggcttctgcaggcacttcaaactggatg
acagttgtcctcaagaatatcttctctcaactcgatacatttccagtttctccagtaggc
tctgcttgccaaagatccggagtatatgcgaactttgttccgttccttttgatggtcgat
atcaagggaaacgagccactgttaagcgggctagccgcgtggcttagaaattccactgaa
gacctcatccattacacccgcggcagtcgcgtactcgccggtatttttacgcagtgtata
ttgctagccgacctcatatggggcagagtgatggccaagcgagtgatcaaggaacttgta
gtcgagttgcattcagttacgacactgggtgtcagatcaggcgggcaaagcgaggaaacg
actcaactccacagtcgcaaaatgaaacatcgtgatggacgccgcctgacttctgaacaa
aggtcgatgtgtgaggatatagtcaaaatgttgacctatgacgatggattgagggctagg
tgggggaatcattgggtagatttagccgtataa
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