Cryptococcus deneoformans JEC21: CNF03230
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Entry
CNF03230 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CNF03230
Spliceosome [BR:
cne03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CNF03230
Other components
Complex C specific factors
CNF03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
3258188
NCBI-ProteinID:
XP_024513047
UniProt:
Q5KF34
LinkDB
All DBs
Position
6:join(961176..961468,961522..962563,962617..962842,962898..963088,963135..963385,963435..963762,963823..964085,964141..964606)
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AA seq
1019 aa
AA seq
DB search
MPRRKNDYLSDGSDSDASNSARSQDGYNSQEDPDARDERRLFEFKGNKRRKTDGRSGKDA
AWEGIFGEEDGVGGVPRRGGIGGRGRPGPSSLRADWTKAPAFVSNGSKTLQEEEEEGQVR
QANTEEPERDEDENGSESSTSSDSDSGSENDDNGSSPAPSPRIRDADDYNGEKQTTGGLG
LGFRNASAQGATDEPTGEAGKREEGDATELASRSKAGIGAGLSAGKKTLPDETIYSVGNE
PHARSSTNDTIDHGPKPTGIPSSFGRPPPSLTAHSGHHTQRRFLPRAQSPAASTTKAQLT
ASEKAHFSKIQSSFGARLLAKQGWEVGKGLGVQENGRAVPIEVGKVLRGQGIQRGIRTED
SKREARRQGVTFSDDEDDEAPRRRRHREKGPKVHKEKNEEDQGWKRQKKVKVKVQHKTYE
QLLAEAGDAVPAAGIGLVLDARGGELKEVQSLSSLSLSTWTPSSDSTRLPELRHNLHLIV
DAAKQDVSGLVREGKKVNERRRWALREEEISRAKAEEASTKISRLKEIQEIVDTISHVAT
EQTVSSTSSLAPLSNSFELLIHKFQEEYQSLKLDDVIVGAIGQILRNAFTEWRPFDVSSN
VLLSSLKTWKKAYNLPEIIDNDTAVATLSLRGKNAAVDRIDAGGERVMTAWESLIWHLWV
PKVRSAINNEWDPLSPNDAVHLVESWEPILPLFVKDNILDQLVLPKVKVAIEQWDPKRNK
RERRSKSLASIVFPWLPLLGERVDEVMDLAKRRIRHVMRSWAVKDGVPEELSRWRKDVYS
SNEWDKLIIQFVLPKLGLCLREDFTINPRKQDMVPLQDWVLPWHRLIRQSMFSHLLEVEF
FPKWLDVLYIWLIQPSYKANEVATWYQWWSERFPEEVRDMPGVKQGFESGLNLMQEAMDL
GPDAPAKLHKPKFEPRSTKKVLQTSTTPKLRKPEPPGIVATDITFRSIAEDYAAQHDLIF
LPLGRSHDKTGKPLFKVCRNVDGKGGVTVYIGEYAVFAKMDDGEFRAISLEDMVKKASA
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaagaaaaaacgactatctctcggacggctctgactcggacgcctcaaattcg
gctcgctcccaagacggttacaactctcaagaggacccggatgctcgagatgaacggcgc
cttttcgaattcaaaggcaacaaacgtcgcaagactgatggacgcagcgggaaagatgcc
gcttgggaaggtatatttggggaagaagatggcgtaggaggggtgccgagacgtggaggt
atcggcggtagaggacgtcctggaccttcttcattgagggctgattggacaaaagccccc
gcgtttgtatccaatgggtccaagactttgcaagaggaggaggaagaaggccaggtgcga
caggccaatactgaagagccggaaagagatgaagatgagaacggttcggaaagcagcact
agctctgactctgactctggttctgaaaacgatgataacggcagctctcccgccccttct
ccccgtatcagggatgcagatgattataacggagaaaaacagactacagggggattgggc
ttgggtttcaggaatgcctctgcccagggtgccactgacgaacccacaggagaagccgga
aaaagagaagaaggcgacgcaacagagcttgcttctcggagcaaggccggcattggtgct
ggattatcggcgggaaagaaaacgctgcccgatgagactatatacagtgtcggaaatgag
cctcacgcaaggtcttctaccaacgacaccattgatcatggtccaaaacctacaggaatt
cctagtagttttggaagacctccgccttctcttactgcgcactccggtcatcatactcag
cgtcgcttccttccaagggctcagtcgccagcggcgtccacaactaaagcccaactgact
gcgtcggaaaaggcccatttcagtaaaatccaatcatcgtttggggcccgtctgttagca
aagcagggatgggaggtcggtaaaggtttgggtgtacaagaaaatggtcgtgctgtacca
attgaagtcgggaaagttctgaggggtcaaggtatacaaagaggaattaggactgaggac
agtaagcgagaagcaagacggcagggtgtgaccttttcggatgatgaggatgatgaagca
ccgaggagaaggaggcatcgagagaagggaccgaaggtgcataaagaaaagaatgaagaa
gatcagggttggaaaaggcagaaaaaggtcaaggtcaaagttcaacataagacctatgaa
cagttattggccgaggcgggtgatgctgttcctgcagctggcataggccttgtgttggac
gctcgaggaggagagcttaaagaggtccagtcgctgtcgtccctttcgctttccacttgg
accccaagttcggactcgacaagattacctgaacttcgtcataatctccaccttatcgtc
gatgctgctaagcaagatgtctcgggtttggtaagggaagggaaaaaggtaaatgagcga
cggcgttgggccctgcgtgaggaagagatttccagggccaaggctgaagaagccagcacc
aagatctctcgtctgaaagaaatacaggagattgtcgatacgatcagtcatgtagccacg
gaacagacagtctcatcaacaagttctcttgcgcctttatccaatagctttgaactgcta
attcacaagtttcaagaagaatatcaatctctgaaattagatgatgttatcgtgggtgca
attggacaaattctacggaatgctttcacagaatggcgacctttcgatgtatcatccaac
gttttactctcatctctcaagacttggaagaaagcgtataatttacccgaaatcattgac
aatgatactgctgttgcaactctgagcctcaggggaaaaaatgctgccgtcgataggata
gatgccggtggcgaaagggtaatgacggcttgggaaagtctcatttggcatttgtgggta
ccgaaggtacgctcggcgataaacaatgaatgggatcctttgagccctaacgatgcggtc
cacctagtcgagtcttgggaaccgatccttcccctgttcgtaaaggataacatactcgac
cagcttgtattgccaaaagtcaaggtagcaatagaacaatgggatcccaagcggaacaag
cgcgagcgccgttcgaaatctctcgcgagtatagtgttcccatggctgccactactgggt
gagcgggtcgacgaggttatggatcttgccaaacgccgcatccgccatgtcatgcgcagt
tgggcagtcaaagatggcgttccggaagagttgagccgctggcgaaaagatgtatattcg
tcaaatgaatgggacaagctcataattcagttcgttttgcccaaacttgggctctgcctt
cgagaggacttcacgatcaatcctcgcaaacaagacatggtgcccttgcaagattgggtc
ctcccgtggcacagactcattcgacaatcaatgttctctcatttgctcgaagtggaattc
tttcccaagtggctcgatgtcctatacatctggctcatacagccatcatacaaagccaat
gaggtcgctacatggtatcaatggtggagtgagcgcttccctgaagaggtgcgcgacatg
cccggtgtcaagcaaggttttgagagcggtctcaaccttatgcaagaagctatggacctc
ggtcccgatgcacccgcaaagctccacaagcccaaatttgagcctcgttcgactaaaaag
gtgctccaaacctcaacgacccctaagcttcgcaagcccgaacctcctggtattgttgcc
accgacatcacattcagatccattgcagaagactacgccgcgcaacacgatctcatattc
ctacccttgggtagatcacacgacaagaccggaaaaccgttgttcaaggtgtgcagaaac
gtggatggtaaagggggtgtcacagtgtatattggggagtatgcggtgtttgcgaaaatg
gatgatggagagttcagagcgatatcgctggaggatatggtcaaaaaagcatcggcgtag
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