Cryptococcus neoformans var. neoformans JEC21: CNF03440
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Entry
CNF03440 CDS
T00243
Name
(RefSeq) late endosome to vacuole transport-related protein, putative
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne04138
Autophagy - yeast
cne04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CNF03440
04148 Efferocytosis
CNF03440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cne04131
]
CNF03440
Membrane trafficking [BR:
cne04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CNF03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_VPS8_2
VPS8_N
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40
PEP5_VPS11_N
Beta-prop_HPS5
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
3258036
NCBI-ProteinID:
XP_024513053
UniProt:
Q5KF16
LinkDB
All DBs
Position
6:complement(join(1014290..1016857,1016905..1017105,1017158..1017951,1017990..1018502,1018542..1019433))
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AA seq
1655 aa
AA seq
DB search
MAQPSIPDHLHDGEELDEDLADITSQTRLSLSSASSGNRTARQSRSSSSATIRNLSAGGL
FGRIRRRGKEDDYSDEDEEAIAGEELADTASPIPARGWRTHLTDDQDNEVEAGPSDYHER
ETATPSTPTSSSLPPSGWRQPSTQPFDPDALEEGPSDYWGAGTPPVVPAYLHESTPSTTI
DSPVINEYDDDEYERRIRDVMAHNAQSTPGTNSPNLSVSESFPYHPSQIHGNRLHGRAHL
DEKADSGIGEEEFGRRKVLIDDVSEATPSVASATPSKLQERYAPGSALSPSKRTSFIHPS
VSRLRSHMRSSSSATQQSVQHPQLLQLRAPSHFSQIDVAKSETMSTTSAPLQPSNLPVQP
PNIPRNKAELNQGPAFQFHPLRKLSAHLFARQTNGTSSPRPDINKRAGSVLKLPLGSPTT
KEIPEAQNLGKPTVMDIRGMIAVGTDRGYIVVYGFGQEIKYILGPEEPTSAITAVAISSD
ETYIAVGFSSGSIYLYDLSSPSSPARTAHFLTLKQIQSGRREGHLEGSRILHIGFVGARH
TSIVSGDEHGRAFWWSLGKVMGVESTDVIRMLGSYPSGLIPTTAPPYPAKRPTTLFSASP
LPLGDSPHPTDKFSLSALLTPSKLVIVGMKPQAKTWFRKMRDGAGGDQGAYTGCTSWLRS
GEVGKGFEKEVAKKKKVLEEVSDPVIAYSWGKAVRFVRVRVQEIGDDVSPDFVEGRKWEA
GESVKFLDWYDSNHLLVITVSQLTLLDVRSMKAVEETPLQTQLLTSQDFYSGLSVKGIME
NVPKSFAGSVRTHRGKLFLLTKSNLQVGTLLHWNDRILSQVHRGDFLSAINVALSYYNGT
ATGNTINLPFEASFRKEVVGKRIKELMKASLEWAFSPDRMSDDTHYSADGRGVDLTDLFE
GLAASCIEACLDIGDTDFLFNDSYEHFSQMGIQGIFLHILEPFIFSGRLREVPPDIIKAL
ITMHSEKGELDQAESMIWHVEPMSLDINQAITLCEAHGLWDAMIHVYTRAMRDYVAPIVK
LIGVVRDIQQHRSNRPSLVRDERDGTEEMAPNAYKLYSYIETVLSGLSYPSGEALPEIEA
HQAQTEVYTFIFQGRTVAWPQGGHDLVLTMDSKHSEPPYPYLSLLLHFDTEAFLHAMDIA
FEDSYLNDPTGAINRQSIVNLMLDVMDPEYFHPGDITLLHIFVARNLPKYPQFLFIPPST
LHRILVSLASDPDQSTREDRQLAAEYLLSAYTPHDGEAMLSLFETAGFFRILSEAYRREG
KWGKLISTLLRDPESDDEVFTALEEIIKTATPSAEVNQAVVDALPHLFDLGVRETAILLD
KELSNIHPQAIQALGHAPHKQMAYLRCLLEPDPEETHNAPSSNIDLPSRHLYITLLAQHD
PGHIVSFLDERGPSSFDLPRLVDQLDEAGLYEAELWALDRQGKVKETFVKVGDVLRTKGG
ELGEALVNDDVGSVHLALETIQGVAKMAVRLCREHSSPKVEGRNESGRGAMEVEDMWLGV
LHEIIELVHTSSALTSISSDTVVLDTLRSLVQETLSSLVSSSSPSLSFPRLFKRLVDAST
TTTKQSSKGRAYSEFRTILMGMLDSYRAEGEMLNMTTKLVEADLGEVTAEFVEKSMRGWR
AEGGQCGECGKNLKKDQSWVVLGSGSVLHKSCFQV
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccatccattcctgatcatctccatgatggtgaagagctggatgaagatctg
gctgatataacgagccaaacacggctttcactatcttccgcctcgtctggaaaccgcaca
gccagacaaagtcgaagctcaagctcagcaacaattcgcaacttaagtgccggagggtta
ttcgggaggataaggcgaagaggaaaagaagacgactattcagatgaagacgaggaagcg
attgcgggggaagaactcgcagatacagcgagtccaattcctgctcgtgggtggaggact
catctcaccgacgatcaggacaacgaagtcgaagcagggccgagtgactatcacgaacgg
gaaacagcgacaccctcgacccctacatcatcaagccttcccccatccggttggagacaa
ccgagcacccagccgtttgacccagatgcgcttgaagagggacccagtgattactggggt
gccggtaccccgcctgtcgtaccagcatacctacatgagagtaccccatcaaccactata
gattcaccggtcatcaacgaatacgatgatgatgagtatgagcgacgaatacgagatgtt
atggcccacaatgctcaatcgactcccggaaccaactccccaaatctcagtgtcagcgaa
tcattcccttaccatccgtctcaaattcacggcaatcgcttgcatggaagggcacacctt
gatgagaaagctgactctgggatcggagaagaggagtttggccgacgaaaagttttgatc
gacgatgtgtccgaagccactccatctgtcgcctcggccacaccttcaaaactacaagaa
cgatacgctccagggtccgcactaagcccttccaagcgaacgtctttcatccatccctcc
gtttcccgtcttaggtcacacatgcgttcatcatcctctgctacccagcaatctgtccaa
cacccgcagctcctgcaacttcgcgcacccagtcacttttctcagatagacgtggccaag
tcagagactatgtctactaccagtgctccccttcagccctccaaccttcctgtgcaacct
ccaaacattccaaggaacaaagcagagctcaatcaagggcctgctttccagtttcatcct
ttacgcaagctttcagcccatcttttcgctagacaaactaacggaacgtcgtcacctcgt
ccagacataaacaaaagggcaggctcggtattgaagctaccattagggagtccgaccacc
aaggaaataccagaagctcaaaatttgggaaagcctacggtcatggatatacgaggcatg
atagctgttgggactgataggggatatattgtcgtctatgggttcggacaagaaatcaag
tatatattaggtcctgaagaaccaacgtcggccatcactgctgtggccatatcctcagat
gagacttacattgctgtcggtttttcttctgggtccatttacttatatgacctttcttcc
ccttcttcacccgcccgtacagcccacttcctcactctcaaacaaattcagtctggcaga
cgagaaggtcatctggagggtagccggatactgcatataggtttcgttggcgcgaggcat
acctcaattgtcagcggtgatgaacacggacgtgctttttggtggagcttaggcaaggtc
atgggagtggagagtacggatgtcattcgtatgcttggctcttatccgtccggcttgatt
ccaaccaccgctccaccttatccggccaagagacctacaactctcttttcggcctctcct
ctccccttaggcgactctcctcaccctactgacaaattctcactttctgctctcttaacg
ccatcaaagcttgtcattgtagggatgaaaccacaagctaagacatggttccgcaagatg
cgtgatggagccggtggcgaccaaggtgcttataccgggtgtacatcatggttgaggagc
ggagaagttggtaaagggtttgaaaaggaagtggcaaagaagaagaaggttttggaggag
gtttcagatcccgtaattgcgtattcgtggggtaaggctgtgaggtttgtcagggtcagg
gtgcaggaaataggcgacgatgtatctccagactttgtggaagggagaaaatgggaagcc
ggagagagcgtaaaatttttggactggtatgattctaaccacctgcttgtgataacagtt
tcccaattgacccttcttgacgtacgatcaatgaaagctgttgaagagacacctttgcaa
acacagctcttgacaagtcaggacttttattcgggattatctgtcaaaggtatcatggaa
aatgtgccaaagtcatttgcgggaagtgtgagaacgcaccggggcaaactctttttgctt
acaaaatccaacttgcaagtgggcactcttcttcactggaacgaccgtatcctttcacaa
gttcatcgtggcgattttctctctgccatcaatgttgctctttcctactataatggtact
gccaccggtaacacaattaaccttcctttcgaagcttcatttcgcaaagaggtggtggga
aagaggatcaaggagttgatgaaggcctctttggaatgggcgttctcgccggacaggatg
tcggacgatacccattacagtgccgacggacgaggtgtagacctgacagatctgtttgaa
ggccttgccgcatcctgtattgaagcctgtctcgatattggtgataccgacttcctcttc
aatgactcatatgagcacttttctcaaatgggtatccaagggattttcctccacatcctt
gaacctttcatcttctccggtcgactgcgtgaagtcccacccgacatcatcaaggctctc
attaccatgcatagcgaaaaaggcgagctcgatcaggcagaatcgatgatttggcatgtt
gagcccatgtcacttgatatcaaccaggctatcactctttgtgaggctcatggattatgg
gatgccatgatacatgtttacactcgagccatgagggactacgtcgcaccgattgtcaag
cttattggcgttgtgagagatatccagcagcataggtcgaatagaccttcacttgttagg
gacgagagagatggtacagaagagatggctccaaacgcttacaagctgtactcctatatt
gaaacggtcctttccggcttatcctaccctagcggtgaagctcttcccgagattgaagcc
catcaagctcagactgaggtatatacgttcatcttccaagggcgtacagttgcatggcct
caagggggccatgatctcgtcctcacaatggacagtaaacactctgagccaccatatccc
tatctcagccttctccttcatttcgacacggaagctttccttcatgccatggatattgcc
tttgaagattcctaccttaatgaccctaccggggcaataaatcgccaatccattgttaac
ctcatgttagatgttatggacccagagtacttccacccaggagacatcaccctcctacac
atttttgtggcgaggaacttgccaaagtacccacaattcctcttcatacctccctctacc
ctccatcgtatcctcgtcagcctggcaagcgaccccgatcaatcaacaagggaagatcgg
caacttgcagctgaataccttttgtcggcttataccccacacgatggcgaagctatgctc
tccctctttgagacagctggtttcttccgtatccttagcgaggcctatcgacgagagggc
aagtggggcaagttaatatctactctgttgagagatcccgaatcggacgatgaagtgttt
actgcattggaagagatcattaaaaccgctactccatccgcagaagtcaatcaagcagtg
gttgatgctctgcctcatctgtttgacttaggggttagggaaacggcaatactattggac
aaagagctttctaacatccacccacaagccatccaagccttaggtcacgccccccataag
caaatggcatatctgcgatgcttgctcgagcccgacccagaggagacgcacaatgcccct
tcaagcaacattgatctgccaagccgtcacttgtacattacgttactagcacagcacgac
cctggacacattgtgtcattcctcgacgagcgtggtccttcttcctttgatctcccgcgg
ctagtggaccaactggacgaggccggattgtatgaagctgagctttgggcgctagacagg
cagggcaaggtcaaggagacttttgtgaaggtgggcgatgtgttgagaacaaagggcggg
gagctaggagaagctttggtgaatgatgatgtaggaagtgtccatttggcgctggagact
atccagggagtggccaagatggcggttaggctttgccgagaacactcttcaccaaaggtt
gaaggtcgaaatgagagcggaagaggggcaatggaagtggaagatatgtggcttggagtg
ctccatgagattatcgagctcgttcatacctcttctgctctcacctccatctcgtctgac
actgttgttctcgacactcttcggtcacttgtccaggagactctctcttcacttgtttcc
tcatcctctccgtcactctcttttccccgtctcttcaaacgacttgtggatgcttcaact
acgaccacaaaacagtctagcaaaggaagagcgtatagcgagttcagaacaattctcatg
gggatgttggattcttacagggcggaaggagagatgttaaatatgaccacaaagttggtg
gaggcagatctgggcgaagtaaccgccgaatttgtcgagaaaagtatgcgaggatggaga
gctgaaggaggacaatgcggagaatgtgggaaaaatttgaaaaaggatcagagctgggtg
gttctcgggtctggctctgtccttcacaagtcatgtttccaagtgtga
DBGET
integrated database retrieval system
