Cryptococcus deneoformans JEC21: CNG00450
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Entry
CNG00450 CDS
T00243
Name
(RefSeq) transcription initiation factor IIA small chain, putative
KO
K03123
transcription initiation factor TFIIA small subunit
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNG00450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNG00450
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
CNG00450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA_gamma_N
TFIIA_gamma_C
DUF3120
Motif
Other DBs
NCBI-GeneID:
3258569
NCBI-ProteinID:
XP_024513163
LinkDB
All DBs
Position
7:join(115118..115161,115237..115324,115388..115536,115621..115714)
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AA seq
124 aa
AA seq
DB search
MSAGQTYYEFYRGSSIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNK
TTIKGHLSTYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKSGDAADGKKAG
GARE
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctggccagacatactacgagttctaccgaggatccagcatcgggacagctctt
acggatgcgcttgatgagttgatcacgcagggagatattcctccccaactggctatgcgg
gtgcttcaacaatttgacaaatccctgactgaatgccttcaaaaaggtgttaagaacaag
accactatcaagggccatctttcaacttatagattatgtgacgatgtgtggacgttcgtt
gtaaaggatcctcaatttaagatggaaggcgttggcgccggatctgaaatggtcaccgga
tccaagatcaagatagtggcgtgcaagagcggcgatgcggcagatggtaagaaagccgga
ggtgcaagagaataa
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