Cryptococcus deneoformans JEC21: CNG00480
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Entry
CNG00480 CDS
T00243
Name
(RefSeq) coatomer alpha subunit, putative
KO
K05236
coatomer subunit alpha
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cne04131
]
CNG00480
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cne04147
]
CNG00480
Membrane trafficking [BR:
cne04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CNG00480
Exosome [BR:
cne04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CNG00480
Exosomal proteins of bladder cancer cells
CNG00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
DUF5074
Beta-prop_IFT122_1st
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
3258807
NCBI-ProteinID:
XP_571751
UniProt:
Q5KEH7
LinkDB
All DBs
Position
7:complement(join(120021..120263,120327..120599,120658..120984,121052..121777,121827..123646,123694..123813,123864..123965,124026..124065,124118..124135))
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AA seq
1222 aa
AA seq
DB search
MQMLTKFESKSPRVKGIAFHPKQPLLAASLHNGTIQLWNYQMGTLVDRYDEHDGPVRGIC
FHPTQPIFCSGGDDYKIKVWNYKQRKCLFTLTGHLDYVRTVFFHREYPWIISASDDQTIR
IWNWQSRTCIAILTGHNHYIMCAQFHPWDDLVISASMDLTVRVWDISGLRKKNQASQAPM
SAEEQIARASQGQADLFGNTDAVVKYVLEGHDRGVNWASFHPTLPLIVSCGDDRQVKLWL
MSETKAWEVDSCRGHFNNVSMTMFHPKHELILSASEDKTIRAWDMTKRTAVQTFRREHDR
FWVLTAHPELNLFAAGHDNGLIVFKLERERPPFSLSGNQLFYIKDKVVRMADISSGNSQG
ICSVRKFGSQYIPPRTLSYNPAERAVIVTSPSDNGIYELITLPKSTAPTAQDGRDVPSDG
KKGTGFCALFVARNRFAVLDKGAQNIEIKDLSNSITKTIKCPVQTSEIFYGGTASILLAT
PSSVVLFDIQQQKIVAEINTPPVKYVVWSTDGNMVALLSKHTITIANKSLSQSALIHETI
RIKSAAWDDSGVLIYTTLNHIKYALSQGDNGIIKTLEQPVYLTRVKGSVVHCLDRSAKPQ
AINIDPAEYRFKLALNRKNYDEVLHIIRNSNLVGQSIIGYLQKKGYPEIALHFVQDEQTR
FDLAIECGNLAVALEMARAVDRHDVWERLGAAALQQGNHQIVETAYQKTRNFDKLSFLYL
ITGNTQKLNMMQVIAGKRGDNMSRFQNSLYLGDVRSRVVVLRETGQYPLAYYTAKTNGLD
DLALEILDEAGLTEDDLPPPPQNSGHSSLAPPPITFSQSDSNWPLKDLGESFFDRALANG
GVDALIGGEESGEQLDAWAADVPVEEDEGEEQAADEDEGWDLDANVEVPDVEEEEFDGED
VLAEADLSQGVEPGASEDEIWQNNSALAIDHAAAGAFESAMLLLNKQVGVVNFEPLKPLF
LQAYQHSHVYVPANASLPPLRLNVRRNPETAELRDALPAVPLNYNELKATEVADANKYFA
RGKFVEALATFKNVLSKLLLVVVESEEDAEEIKELVTSCREYIIGLTMEVERRRIAVQDP
ENVVRNLELAAYFTHCELATQHIQLALRSAMKVFSDAGNTATAAVFARRLIETQPGQAVI
TQARAVISRGQRNPRDAHEIAYDQNASFNICAATHTPIYEGSPYEESAYSGAKYLPEYKG
TVCVVDGLSQVGLAGSGLRNMV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgctcacaaagtttgaaagcaaatccccaagagttaagggcatcgccttccac
ccaaagcagcccttgcttgcggcgtccttgcataatggaacaatccaactatggaactac
cagatgggcactttagtggaccgatatgatgagcatgatggtcctgttcgaggtatctgt
tttcaccccactcaacccatcttctgttccggtggtgatgattacaagatcaaggtgtgg
aactacaaacaaagaaaatgcctttttactctgactggccatctcgactatgtccgaact
gttttcttccatcgggaatacccctggattatctctgcatccgacgaccagactatcaga
atctggaactggcaatcaaggacttgtattgccatcctcaccggccacaaccactacatc
atgtgcgcacaatttcacccgtgggacgacctcgtcatctccgcctctatggaccttacc
gttcgtgtatgggacatctccggtctccgcaagaaaaaccaagcttctcaagctcccatg
tctgccgaagaacaaatcgctcgtgccagccagggtcaagctgatttgtttggcaacacc
gatgctgtagtcaagtatgtcctcgaaggtcacgaccgaggtgtcaactgggcttccttc
catcctacccttcccctcatcgtctcttgtggtgatgaccgccaagtcaagctttggctt
atgtccgaaaccaaagcctgggaagtggacagctgcagaggtcacttcaacaacgtctcc
atgactatgttccaccccaagcacgagttgattttgagtgcgagtgaggacaagactatc
agggcttgggacatgaccaagagaacagccgtccagacctttaggcgggaacacgatagg
ttttgggtgttaactgcccaccctgagctcaacttgtttgctgctggccacgacaacggt
ctgatagtctttaagcttgaacgagagcgtccccccttctccttgtctggtaatcaactt
ttctacatcaaagacaaggttgtacgcatggccgacatatctagcggtaacagccaaggc
atctgctccgtccgcaagtttggctcccaatacattcctcctcgaaccctcagctacaac
cccgctgaacgagctgttatcgtgacatctccttctgataacggtatctatgaacttatc
actctgcccaagtctactgcgcctactgctcaggatggcagggatgtgccttcagacggt
aagaagggtacagggttctgtgcgctcttcgtggcaaggaacaggttcgcagtcctcgac
aagggtgcccagaacatcgaaattaaggatctttccaactctatcaccaagactatcaag
tgccctgtccagacgtctgagatattttacggcggtacggcgtccattttgctcgccact
ccttcttctgtagtccttttcgacattcagcagcaaaagattgttgccgaaatcaatacc
cctcccgttaagtatgttgtatggagcaccgatggtaacatggtcgccctcttgagcaag
cacacaatcaccattgccaacaagtctctttctcaaagcgctctcatccacgagacgatt
cgaatcaagtctgccgcttgggacgacagcggtgtgctcatatacaccactttgaaccac
atcaagtacgctctttctcaaggtgataacgggatcatcaaaactcttgaacagcctgtg
tacctcactcgagtcaagggttctgtcgttcactgtctcgaccgttccgccaagccgcag
gctattaacattgaccctgctgagtaccgattcaagcttgctctcaaccgcaagaactat
gatgaagtcttgcatatcattcgaaatagcaatcttgttggtcagagtatcattggttat
cttcagaagaagggataccccgagatcgctctccactttgtgcaagatgagcagactagg
ttcgatcttgctattgagtgtggtaacttggcggttgcgttggagatggctagggctgtt
gacaggcatgacgtttgggagaggttgggtgccgctgcgttgcagcaaggtaatcatcaa
attgtcgagaccgcgtatcagaagactagaaacttcgacaagctctccttcctctatttg
atcaccggcaacacccagaagcttaatatgatgcaagtcatcgctggcaaacgaggcgac
aatatgtctaggttccaaaactctttgtacctcggtgacgttcgatctcgtgtcgttgtg
cttcgtgaaactggccagtaccccctcgcttactacactgccaaaaccaacggccttgac
gaccttgccttggagattcttgatgaagctggcttgaccgaggatgacctgcctcctccc
cctcagaactctggtcactcttccctcgccccccctcccatcaccttctctcaatccgac
tccaactggcctctcaaggaccttggtgagagcttctttgaccgagcacttgctaacggt
ggtgtcgacgctttgatcggcggtgaagaaagtggagaacaactggatgcttgggcggcg
gatgttcctgttgaggaagacgaaggagaggagcaagctgctgatgaggatgaaggatgg
gatcttgacgccaacgtcgaagtgcctgatgtcgaagaggaagagtttgacggtgaagac
gttttggctgaggcggatttgagtcagggtgtcgagcctggtgcgagcgaggatgagatt
tggcaaaataactctgcattggctatcgaccatgcagccgccggtgctttcgaatctgcc
atgcttttgctcaataagcaagtcggcgttgtcaactttgaacctcttaagcctttgttc
ctccaagcctaccaacactctcacgtttacgtccctgccaacgcttccctccctcctctt
cgactcaatgttcgccgaaatcccgaaaccgccgaacttcgcgacgccctgcctgccgtt
cctctcaactataacgagctgaaggcaaccgaggtggccgatgccaacaagtactttgct
aggggtaaatttgttgaggcgcttgcaacgttcaaaaatgtattgtcaaaacttttgttg
gtagttgttgaatccgaggaagatgctgaggagataaaggagcttgtcacctcttgtcga
gaatacatcattggcctcactatggaagttgaacgacgacgaattgccgtccaagatccc
gaaaacgtcgttcgaaaccttgagctcgccgcttactttactcactgcgaacttgctact
caacatatccaattagcattgcgtagtgcgatgaaggtgttctctgatgcgggtaacacc
gccaccgctgctgtgtttgctaggaggttgatcgagacacagcctggtcaggctgtcatt
actcaagcccgtgctgtcatctcccgaggccagcgtaaccctcgagacgcccacgaaatc
gcctacgaccaaaacgcatcattcaatatttgcgctgctacccatactcccatttacgag
ggctcaccatatgaagaaagcgcgtactctggcgccaagtacttgccagagtacaagggt
acagtctgcgtggttgatggattgagccaagtcggtttggctggaagcgggttgagaaac
atggtttaa
DBGET
integrated database retrieval system
