Cryptococcus deneoformans JEC21: CNG01950
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Entry
CNG01950 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K14575
AAA family ATPase
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNG01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNG01950
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CNG01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_5
AAA_22
AAA_2
TIP49
nSTAND3
AAA_33
AAA_28
AAA_14
Rad17
Mg_chelatase
IstB_IS21
RNA_helicase
NPHP3_N
AAA_18
TsaE
AAA_11
NACHT
bpMoxR
Molydop_binding
Zeta_toxin
Parvo_NS1
Peptidase_A3
Motif
Other DBs
NCBI-GeneID:
3258791
NCBI-ProteinID:
XP_571889
UniProt:
Q5KE28
LinkDB
All DBs
Position
7:complement(join(545630..545743,545795..545881,545938..546228,546280..546369,546418..546926,546981..547569,547616..547905,547957..548187,548244..548454))
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AA seq
803 aa
AA seq
DB search
MSAIVTLRAIPTEADTDALKSIVSRDVRRAYISPETLRTHKVAAGDWMRFKSGSTFIMAQ
AWPKASIDDDVVALSSAQINNLCGSEVEMHHFKAGQSQGRLVSIVLKEVPLTEAPSSSKL
NVVTRPPINLDSPREWVWCKAAIKEALTSLHYVRTGYSLIVGDTEKAPRKFEIISVEVSP
KDIEKRLASIEDGMEELAIDEENQRLYEMHWKTSVSLEVEKLQENKEVHAAIPDEKKVLN
TKDFSKMSTSSVPHYINFFTPAESPVSAYTFLGGLQSQIDQIKTLLDLPMLHPDLYIKFG
LNPPRGILLHGPPGTGKTALARAVASSAGCSCIVVNGPELSSAYHGETEERLRGVFTEAR
KRSPCIVVLDEVDALCPRRDGGEGGEVERRVVATLLTLMDGMSHESLEGERVFVVAATNR
PNSIDPALRRPGRFDREIEVGVPDVKGRREILDIMLSKIPHSLSEKDLSSLAARTHGYVG
ADLFSLVRESASAAISRFHLSPSSTLSEPVLTNADILSTLPSIRPSAMREVFIETPTVRW
SDIGGQQDVKQKLRECIEWPLMHRDTFKRLGVEAPRGVLLYGPPGCSKTMTAKALATESG
INFIAVKGPELLNKYVGESERAVREIFRKARAASPSIIFFDEIDALGSARSDDHAHSGVL
TSLLNEMDGVEELSGVTVVAATNRPDVLDSALMRPGRLDRILYVGAPDFETRKDIFRIRL
ATMAVEPGINVEQLAEITEGCSGAEVVSICQDAALAAMNESLDAPYVKASHLVNSAHTVR
RRITPEMIAFFEEWRDLSGVRSA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccattgtcacactccgtgcaatccctactgaggctgacacggatgctttgaaa
tcgattgtcagccgtgatgtccgtcgtgcatacatctctccggagacactccggacgcac
aaagtagctgccggtgattggatgcgatttaagtcaggcagtactttcattatggcccag
gcatggcccaaagctagcatagatgatgacgttgtggcactttcatcagctcaaatcaat
aatctttgcgggtcagaggtagagatgcatcatttcaaagccggacaaagccaaggccgc
ttggtatcaattgtgctgaaggaagtacctttgaccgaagcaccctcgtcttccaagctg
aacgtcgttactcgaccgcccataaacttggatagcccaagagaatgggtttggtgcaaa
gctgctatcaaggaggcactcacttccttgcactatgtcaggacgggctactctcttatc
gtcggtgacactgaaaaggcacctcgcaagtttgaaatcatctccgtcgaagtgtctccc
aaggatattgagaaacgtttagcgtcgatcgaagacggaatggaggaacttgctattgat
gaagaaaaccagcgactgtatgagatgcactggaaaacttcagtgtcccttgaagtagag
aaacttcaggaaaataaagaggtgcacgcggccattccagacgaaaaaaaggtgctcaac
actaaagacttctcgaagatgtctacaagttccgtccctcattatatcaactttttcacc
cccgccgaatcccctgtttccgcttatacatttctggggggccttcaatctcaaattgat
caaatcaagacccttctagatcttccgatgcttcatcctgacctgtatatcaagtttgga
ctcaaccctcctagaggcatcctccttcacggccccccgggaacgggtaagacggcgctg
gccagggcggtcgcatcgtctgctggatgttcttgcattgtcgtcaacggacctgaactt
tcctcagcatatcatggcgaaacggaagaacggttacgtggagtatttacggaagcaagg
aaacgtagtccatgtattgtagtattggacgaagtggatgcgctttgtcctaggcgggat
ggtggggagggaggcgaagttgaacgaagggtggtagctactttgctgaccttgatggac
ggtatgagtcacgagagcttggaaggtgaacgggtatttgtagtagctgctacaaataga
cccaacagcattgatcctgctcttcgtcggccagggaggtttgatagagagattgaagtc
ggtgtgccagatgtcaaaggccgtcgagaaattctcgacattatgctctcaaaaattcct
cattcactttcagaaaaggacctctcttctcttgccgcgcgcactcatggctatgtcggt
gctgatctcttctccctcgtgcgagaatccgcttctgcggccatctcccgctttcatctg
tctccgtcatcaaccctctccgaacctgtcttgaccaatgcggacatcctctcaacactt
ccttccatccggccgtctgccatgcgcgaggtattcatcgaaactccgactgttcgatgg
tcagatataggtggtcaacaagatgtaaagcaaaaactgagagagtgcattgaatggcca
ttgatgcatagagacacgttcaagagactaggcgtagaagctcctaggggagtgttgttg
tatgggcctccgggctgtagtaagaccatgacggctaaagcactggccacagagagtggt
atcaacttcattgctgtgaagggtccggagcttctcaacaagtacgtcggcgagtccgaa
agggcagtaagagagattttccgcaaggcacgcgctgcttccccttctatcattttcttt
gatgagatagacgcccttggctcagcacgatcggatgaccatgctcattccggtgttctt
acttctctcttgaatgagatggacggtgtagaagagttatcgggtgtgacagtagtggca
gctaccaatcgacccgatgtcctggactctgctttgatgcgtcccggaagattggatcgt
atcttgtacgtaggggcacccgactttgagactcgaaaagatatcttccgaatcagattg
gccacgatggccgtggaaccaggcattaatgttgagcaactggccgaaataactgaaggc
tgctctggtgcagaagtcgtctcaatctgccaggatgcggctttggcagccatgaacgaa
agtcttgatgctccatatgtcaaagcttcccaccttgtcaactcagctcacactgtccga
agaagaattactccggaaatgattgcatttttcgaggaatggagagacttatctggggtt
cgtagtgcataa
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integrated database retrieval system
